RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 ZFPM2Q8WW38 1151 aa5.88□□□□□ -1.47
CLIP1-207ENST00000536634 ZBTB9Q96C00 473 aa5.88□□□□□ -1.47
CLIP1-207ENST00000536634 MRPL38Q96DV4 380 aaKnown RBP5.88□□□□□ -1.47
CLIP1-207ENST00000536634 HMCESQ96FZ2 354 aa5.88□□□□□ -1.47
CLIP1-207ENST00000536634 ZFYVE19Q96K21 471 aa5.88□□□□□ -1.47
CLIP1-207ENST00000536634 RAD9AQ99638 391 aa5.88□□□□□ -1.47
CLIP1-207ENST00000536634 ABHD14AQ9BUJ0 271 aa5.88□□□□□ -1.47
CLIP1-207ENST00000536634 FOXP1Q9H334 677 aaPredicted RBP5.88□□□□□ -1.47
CLIP1-207ENST00000536634 CCDC134Q9H6E4 229 aa5.88□□□□□ -1.47
CLIP1-207ENST00000536634 Q9Y3F1 56 aa5.88□□□□□ -1.47
CLIP1-207ENST00000536634 DAAM1Q9Y4D1 1078 aa5.88□□□□□ -1.47
CLIP1-207ENST00000536634 MAP1BP46821 2468 aaKnown RBP5.88□□□□□ -1.47
CLIP1-207ENST00000536634 FAM90A18PA6NE21 464 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 FAM90A16PA6NEW6 464 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 TMEM221A6NGB7 291 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 ASB14A6NK59 587 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 FAM90A9PA6NNJ1 464 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 FAM90A5PA8MXJ8 464 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 M0R296 226 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 USP12O75317 370 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 SURF6O75683 361 aaKnown RBP5.87□□□□□ -1.47
CLIP1-207ENST00000536634 MBD4O95243 580 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 BMP15O95972 392 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 CXCL10P02778 98 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 FAM90A15PP0C7V4 464 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 FAM90A14PP0C7W9 464 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 RARSP54136 660 aaKnown RBP5.87□□□□□ -1.47
CLIP1-207ENST00000536634 VCPP55072 806 aaKnown RBP5.87□□□□□ -1.47
CLIP1-207ENST00000536634 SNAP25P60880 206 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 LAMB3Q13751 1172 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 ZACNQ401N2 412 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 DUSP28Q4G0W2 176 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 LIPMQ5VYY2 423 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 LIN54Q6MZP7 749 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 NFRKBQ6P4R8 1299 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 ADGRF4Q8IZF3 695 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 ZNF366Q8N895 744 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 EXD3Q8N9H8 876 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 SRFBP1Q8NEF9 429 aaKnown RBP5.87□□□□□ -1.47
CLIP1-207ENST00000536634 PABPC5Q96DU9 382 aaKnown RBP5.87□□□□□ -1.47
CLIP1-207ENST00000536634 REXO5Q96IC2 774 aaKnown RBP5.87□□□□□ -1.47
CLIP1-207ENST00000536634 ZNF347Q96SE7 839 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 PIMREGQ9BSJ6 248 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 MTG1Q9BT17 334 aaPredicted RBP5.87□□□□□ -1.47
CLIP1-207ENST00000536634 KATNAL1Q9BW62 490 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 ACAD9Q9H845 621 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 RNF146Q9NTX7 359 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 FBXO40Q9UH90 709 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 SLC12A4Q9UP95 1085 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 CNTN6Q9UQ52 1028 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 ZBED9Q6R2W3 1325 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 MYH7P12883 1935 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 USP24Q9UPU5 2620 aa5.87□□□□□ -1.47
CLIP1-207ENST00000536634 SMG1Q96Q15 3661 aaKnown RBP5.87□□□□□ -1.47
CLIP1-207ENST00000536634 ANKRD11Q6UB99 2663 aaPredicted RBP5.86□□□□□ -1.47
CLIP1-207ENST00000536634 ATRXP46100 2492 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 IGKV6D-41A0A0C4DH26 115 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 SLC38A8A6NNN8 435 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 TRIM38O00635 465 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 TBX10O75333 385 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 IGFBP2P18065 325 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 OAZ1P54368 228 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 B4GALNT1Q00973 533 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 TLE3Q04726 772 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 SF3A3Q12874 501 aaKnown RBP eCLIP5.86□□□□□ -1.47
CLIP1-207ENST00000536634 MIDNQ504T8 468 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 EPC2Q52LR7 807 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 AWAT2Q6E213 333 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 PGBD2Q6P3X8 592 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 CTR9Q6PD62 1173 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 C1orf228Q6PIY5 440 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 TMED8Q6PL24 325 aaPredicted RBP5.86□□□□□ -1.47
CLIP1-207ENST00000536634 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.86□□□□□ -1.47
CLIP1-207ENST00000536634 LRRC8DQ7L1W4 858 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 RASGRP2Q7LDG7 609 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 ASCL5Q7RTU5 278 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 TECPR1Q7Z6L1 1165 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 RPAINQ86UA6 219 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 ARFGAP1Q8N6T3 406 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 ATG16L2Q8NAA4 619 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 OR6J1Q8NGC5 347 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 MORC4Q8TE76 937 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 AFAP1L1Q8TED9 768 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 CLEC4CQ8WTT0 213 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 KAT2BQ92831 832 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 TRMOQ9BU70 441 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 PLCB1Q9NQ66 1216 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 PAPOLBQ9NRJ5 636 aaKnown RBP5.86□□□□□ -1.47
CLIP1-207ENST00000536634 ATP8A2Q9NTI2 1148 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 CYP39A1Q9NYL5 469 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 MSRB1Q9NZV6 116 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 CLIP2Q9UDT6 1046 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 FEM1BQ9UK73 627 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 LZTS1Q9Y250 596 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 SPEGQ15772 3267 aa5.86□□□□□ -1.47
CLIP1-207ENST00000536634 RALGAPA2Q2PPJ7 1873 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 FRYQ5TBA9 3013 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 ZZEF1O43149 2961 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 TRBV5-3A0A0A0MS03 114 aa5.85□□□□□ -1.47
CLIP1-207ENST00000536634 A0A0G2JK05 382 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms