RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 GLUD2P49448 558 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 NEK3P51956 506 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 PPP4R4Q6NUP7 873 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 RNF39Q9H2S5 420 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 C12orf65Q9H3J6 166 aaKnown RBP17.29■□□□□ 0.36
PHRF1-206ENST00000534320 SNX10Q9Y5X0 201 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 EPHA3P29320 983 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 GRK3P35626 688 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 CRHR2Q13324 411 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 SQLEQ14534 574 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 FNDC3BQ53EP0 1204 aaKnown RBP17.29■□□□□ 0.36
PHRF1-206ENST00000534320 ANKS1BQ7Z6G8 1248 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 FAM228AQ86W67 206 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 IFNL1Q8IU54 200 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 PHACTR4Q8IZ21 702 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 PYDC1Q8WXC3 89 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 DPF3Q92784 378 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 REXO4Q9GZR2 422 aaKnown RBP17.29■□□□□ 0.36
PHRF1-206ENST00000534320 CDH19Q9H159 772 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 CNTN3Q9P232 1028 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 ATXN2Q99700 1313 aaKnown RBP17.29■□□□□ 0.36
PHRF1-206ENST00000534320 RGSL1A5PLK6 1076 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.29■□□□□ 0.36
PHRF1-206ENST00000534320 EOMESO95936 686 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 HNRNPLP14866 589 aaKnown RBP eCLIP17.29■□□□□ 0.36
PHRF1-206ENST00000534320 GSTT1P30711 240 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 TALDO1P37837 337 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 CLEC20AQ6ZU45 233 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 DSG4Q86SJ6 1040 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 CLVS1Q8IUQ0 354 aaPredicted RBP17.29■□□□□ 0.36
PHRF1-206ENST00000534320 PTCD2Q8WV60 388 aaKnown RBP17.29■□□□□ 0.36
PHRF1-206ENST00000534320 CAPSLQ8WWF8 208 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 FIG4Q92562 907 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 TMEM79Q9BSE2 394 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 PCDHB9Q9Y5E1 797 aa17.29■□□□□ 0.36
PHRF1-206ENST00000534320 RGS20O76081 388 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 TMEM63AO94886 807 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 ANXA5P08758 320 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 TSPAN8P19075 237 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 YBEYP58557 167 aaPredicted RBP17.28■□□□□ 0.36
PHRF1-206ENST00000534320 SETMARQ53H47 684 aaPredicted RBP17.28■□□□□ 0.36
PHRF1-206ENST00000534320 OOSP2Q86WS3 158 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 SPOCK2Q92563 424 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 APOL4Q9BPW4 351 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 TIAM2Q8IVF5 1701 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 C15orf38-AP3S2A0A0A6YYH1 394 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.28■□□□□ 0.36
PHRF1-206ENST00000534320 SNTNA6NMZ2 147 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 CENPXA8MT69 81 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 CNOT3O75175 753 aaKnown RBP17.28■□□□□ 0.36
PHRF1-206ENST00000534320 MLYCDO95822 493 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 S100A1P23297 94 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 ATP6V0D1P61421 351 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 NAA20P61599 178 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 HSPA14Q0VDF9 509 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 USP4Q13107 963 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 FAM98BQ52LJ0 330 aaKnown RBP17.28■□□□□ 0.36
PHRF1-206ENST00000534320 VARS2Q5ST30 1063 aaKnown RBP17.28■□□□□ 0.36
PHRF1-206ENST00000534320 FUT10Q6P4F1 479 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 ARPINQ7Z6K5 226 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 SLC44A2Q8IWA5 706 aaPredicted RBP17.28■□□□□ 0.36
PHRF1-206ENST00000534320 ZSCAN18Q8TBC5 510 aaPredicted RBP17.28■□□□□ 0.36
PHRF1-206ENST00000534320 MFSD3Q96ES6 412 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 DCUN1D5Q9BTE7 237 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 GTF2IRD1Q9UHL9 959 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 CHKBQ9Y259 395 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 PTPRJQ12913 1337 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 IRS2Q9Y4H2 1338 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 CTPS1P17812 591 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 SCNN1AP37088 669 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 DGUOKQ16854 277 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 Q9Y3F1 56 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 MATN3O15232 486 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 EPB42P16452 691 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 TACR2P21452 398 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 PSMA3P25788 255 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 ARL4DP49703 201 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 TAB1Q15750 504 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 RGS21Q2M5E4 152 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 SWT1Q5T5J6 900 aaKnown RBP17.28■□□□□ 0.36
PHRF1-206ENST00000534320 RHBDF2Q6PJF5 856 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 REM2Q8IYK8 340 aaPredicted RBP17.28■□□□□ 0.36
PHRF1-206ENST00000534320 SPATA22Q8NHS9 363 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 FIZ1Q96SL8 496 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 OXCT2Q9BYC2 517 aaPredicted RBP17.28■□□□□ 0.36
PHRF1-206ENST00000534320 CACNA2D2Q9NY47 1150 aa17.28■□□□□ 0.36
PHRF1-206ENST00000534320 ENTPD5O75356 428 aa17.27■□□□□ 0.36
PHRF1-206ENST00000534320 GABRR2P28476 465 aa17.27■□□□□ 0.36
PHRF1-206ENST00000534320 OGDHQ02218 1023 aa17.27■□□□□ 0.36
PHRF1-206ENST00000534320 VAC14Q08AM6 782 aa17.27■□□□□ 0.36
PHRF1-206ENST00000534320 FBXL19Q6PCT2 694 aa17.27■□□□□ 0.36
PHRF1-206ENST00000534320 DNAJC14Q6Y2X3 702 aaPredicted RBP17.27■□□□□ 0.36
PHRF1-206ENST00000534320 BNIPLQ7Z465 357 aa17.27■□□□□ 0.36
PHRF1-206ENST00000534320 EURLQ9NYK6 297 aa17.27■□□□□ 0.36
PHRF1-206ENST00000534320 SH3BP4Q9P0V3 963 aa17.27■□□□□ 0.36
PHRF1-206ENST00000534320 KLQ9UEF7 1012 aa17.27■□□□□ 0.36
PHRF1-206ENST00000534320 KLHL3Q9UH77 587 aa17.27■□□□□ 0.36
PHRF1-206ENST00000534320 COMMD3-BMI1R4GMX3 469 aa17.27■□□□□ 0.36
PHRF1-206ENST00000534320 MOXD2PA6NHM9 499 aa17.27■□□□□ 0.36
PHRF1-206ENST00000534320 KCNU1A8MYU2 1149 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms