RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 AP1S1P61966 158 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 MSLNQ13421 630 aaPredicted RBP10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 MTM1Q13496 603 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 OLIG2Q13516 323 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 IHHQ14623 411 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 SLC1A5Q15758 541 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 PITRM1Q5JRX3 1037 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 CASC4Q6P4E1 433 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 PKN3Q6P5Z2 889 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 KDM7AQ6ZMT4 941 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 CAPN12Q6ZSI9 719 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 MARK2Q7KZI7 788 aaKnown RBP10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 RASSF3Q86WH2 238 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 ARFGAP2Q8N6H7 521 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 WFIKKN2Q8TEU8 576 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 UCMAQ8WVF2 138 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 GAB3Q8WWW8 586 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 SPOCK2Q92563 424 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 EZH1Q92800 747 aaPredicted RBP10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 ISG20Q96AZ6 181 aaKnown RBP10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 TRIB3Q96RU7 358 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 PAFAH2Q99487 392 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 TDRD1Q9BXT4 1180 aaKnown RBP10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 CEP44Q9C0F1 390 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 POLMQ9NP87 494 aaPredicted RBP10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 SCUBE2Q9NQ36 999 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 PLK2Q9NYY3 685 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 SENP1Q9P0U3 644 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 GGA2Q9UJY4 613 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 GMEB2Q9UKD1 530 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 RIMKLBQ9ULI2 386 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 NOVA2Q9UNW9 492 aaKnown RBP10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 TCAF1Q9Y4C2 921 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 RPS6KL1Q9Y6S9 549 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 FAM169AQ9Y6X4 670 aa10.14□□□□□ -0.79
LDLRAD3-206ENST00000534091 ZCWPW2A0A1B0GU75 182 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 TLDC2A0PJX2 215 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 HEATR9A2RTY3 570 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 AXIN1O15169 862 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 ATP9BO43861 1147 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 FAM155BO75949 473 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 NDST3O95803 873 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 CISD3P0C7P0 127 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 CHRM1P11229 460 aaPredicted RBP10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 NR1D1P20393 614 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 SDHBP21912 280 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 CA4P22748 312 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 ADRA1DP25100 572 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 MSH2P43246 934 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 SLCO1A2P46721 670 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 RGRP47804 291 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 SLC6A11P48066 632 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 RHOAP61586 193 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 CDK18Q07002 472 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 LAMB3Q13751 1172 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 CRY1Q16526 586 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 KBTBD12Q3ZCT8 623 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 FUT11Q495W5 492 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 ANKRD20A4Q4UJ75 823 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 CERCAMQ5T4B2 595 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 SDE2Q6IQ49 451 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 NCEH1Q6PIU2 408 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 TSSK4Q6SA08 328 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 TAOK1Q7L7X3 1001 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 NLRP9Q7RTR0 991 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 SLC26A11Q86WA9 606 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 C12orf40Q86WS4 652 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 LRRC6Q86X45 466 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 PLPP6Q8IY26 295 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 AHI1Q8N157 1196 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 IL17RCQ8NAC3 791 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 PPHLN1Q8NEY8 458 aaKnown RBP10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 TSTD1Q8NFU3 115 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 DCAKDQ8WVC6 231 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 CDKL2Q92772 493 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 ZNF669Q96BR6 464 aaPredicted RBP10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 CERS2Q96G23 380 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 ZC3H10Q96K80 434 aaKnown RBP10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 APOL2Q9BQE5 337 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 CENPHQ9H3R5 247 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 NOD2Q9HC29 1040 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 PIH1D1Q9NWS0 290 aaKnown RBP10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 SMG5Q9UPR3 1016 aaKnown RBP10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 ACTL7AQ9Y615 435 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 PLXND1Q9Y4D7 1925 aa10.13□□□□□ -0.79
LDLRAD3-206ENST00000534091 PTPRZ1P23471 2315 aaPredicted RBP10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 IQANK1A0A1B0GTG1 560 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 SMIM23A6NLE4 172 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 A6NNZ2 444 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 POC1B-GALNT4F8VUJ3 575 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 IGSF6O95976 241 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 GSRP00390 522 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 ASLP04424 464 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 RETP07949 1114 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 INHBAP08476 426 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 PSMA3P25788 255 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 CNTFP26441 200 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 NTSR1P30989 418 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms