RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 HERC5Q9UII4 1024 aaKnown RBP4.42□□□□□ -1.7
ITGB1-219ENST00000534049 CCPG1Q9ULG6 757 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 C15orf41Q9Y2V0 281 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 ASB3Q9Y575 518 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 PCDHGB3Q9Y5G1 929 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 FADS3Q9Y5Q0 445 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 GOLGB1Q14789 3259 aaKnown RBP4.42□□□□□ -1.7
ITGB1-219ENST00000534049 CASZ1Q86V15 1759 aa4.42□□□□□ -1.7
ITGB1-219ENST00000534049 OVOS2A0A0G2JMS6 1433 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 CRB1P82279 1406 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 CLRN2A0PK11 232 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 KPNA5O15131 536 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 USO1O60763 962 aaKnown RBP4.41□□□□□ -1.7
ITGB1-219ENST00000534049 ZC3H11AO75152 810 aaKnown RBP eCLIP4.41□□□□□ -1.7
ITGB1-219ENST00000534049 CCDC192P0DO97 292 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 TOP1P11387 765 aaKnown RBP4.41□□□□□ -1.7
ITGB1-219ENST00000534049 HSPA4P34932 840 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 IL6STP40189 918 aaPredicted RBP4.41□□□□□ -1.7
ITGB1-219ENST00000534049 CTCFP49711 727 aaPredicted RBP4.41□□□□□ -1.7
ITGB1-219ENST00000534049 UBXN2AP68543 259 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 MSLNQ13421 630 aaPredicted RBP4.41□□□□□ -1.7
ITGB1-219ENST00000534049 MTX1Q13505 466 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 BFSP2Q13515 415 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 ITGA7Q13683 1181 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 PPP1R7Q15435 360 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 TMEM196Q5HYL7 178 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 NDUFAF5Q5TEU4 345 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 GALNT17Q6IS24 598 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 KLC3Q6P597 504 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 KIAA0408Q6ZU52 694 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 DGLUCYQ7Z3D6 616 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 ZDHHC17Q8IUH5 632 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 CCDC13Q8IYE1 715 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 MMP21Q8N119 569 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 CCAR2Q8N163 923 aaKnown RBP4.41□□□□□ -1.7
ITGB1-219ENST00000534049 STKLD1Q8NE28 680 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 LILRB1Q8NHL6 650 aaPredicted RBP4.41□□□□□ -1.7
ITGB1-219ENST00000534049 DQX1Q8TE96 717 aaKnown RBP4.41□□□□□ -1.7
ITGB1-219ENST00000534049 WDR60Q8WVS4 1066 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 GLMPQ8WWB7 406 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 BRI3BPQ8WY22 251 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 ZNF845Q96IR2 970 aaPredicted RBP4.41□□□□□ -1.7
ITGB1-219ENST00000534049 COG3Q96JB2 828 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 CATSPER2Q96P56 530 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 HERC2P3Q9BVR0 1158 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 CDK19Q9BWU1 502 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 TM2D2Q9BX73 214 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 PUS3Q9BZE2 481 aaKnown RBP4.41□□□□□ -1.7
ITGB1-219ENST00000534049 DRC3Q9H069 523 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 VPS33BQ9H267 617 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 TCP11L1Q9NUJ3 509 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 ASNSD1Q9NWL6 643 aa4.41□□□□□ -1.7
ITGB1-219ENST00000534049 PARD3Q8TEW0 1356 aa4.4□□□□□ -1.7
ITGB1-219ENST00000534049 BCL9O00512 1426 aa4.4□□□□□ -1.7
ITGB1-219ENST00000534049 ARPC4-TTLL3A0A0A6YYG9 625 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 A0A0B4J203 849 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 A0A1W2PRQ8 180 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 DYTNA2CJ06 578 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 E7ENQ6 273 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 H0Y3Z8 333 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 H3BNX3 289 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 RRHO14718 337 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 TEX28O15482 410 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 PRPF4O43172 522 aaKnown RBP eCLIP4.4□□□□□ -1.711e-9■■□□□ 12.7
ITGB1-219ENST00000534049 LDHAP00338 332 aaKnown RBP4.4□□□□□ -1.71
ITGB1-219ENST00000534049 LINGO3P0C6S8 592 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 GHRP10912 638 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 TRIM27P14373 513 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 PORP16435 677 aaPredicted RBP4.4□□□□□ -1.71
ITGB1-219ENST00000534049 NDUFS1P28331 727 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 TSPAN7P41732 249 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 CASP2P42575 452 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 LIFRP42702 1097 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 ALDH7A1P49419 539 aaKnown RBP4.4□□□□□ -1.71
ITGB1-219ENST00000534049 PRIM2P49643 509 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 VPS41P49754 854 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 MTTPP55157 894 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 TBX4P57082 545 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 TMF1P82094 1093 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 HSPA14Q0VDF9 509 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 XRCC4Q13426 336 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 FHL3Q13643 280 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 PPP2R5BQ15173 497 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 MAPKAPK3Q16644 382 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 C15orf59Q2T9L4 293 aaPredicted RBP4.4□□□□□ -1.71
ITGB1-219ENST00000534049 ARL13BQ3SXY8 428 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 TWF2Q6IBS0 349 aaKnown RBP4.4□□□□□ -1.71
ITGB1-219ENST00000534049 CCDC144NLQ6NUI1 221 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 IRGCQ6NXR0 463 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 C8orf74Q6P047 294 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 TMEM53Q6P2H8 277 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 CYB5D1Q6P9G0 228 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 FIP1L1Q6UN15 594 aaKnown RBP4.4□□□□□ -1.71
ITGB1-219ENST00000534049 ERICH1Q86X53 443 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 LRRC8AQ8IWT6 810 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 LINC00469Q8N7U9 141 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 APPL2Q8NEU8 664 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 ASB12Q8WXK4 309 aa4.4□□□□□ -1.71
ITGB1-219ENST00000534049 TRMT61AQ96FX7 289 aaKnown RBP4.4□□□□□ -1.71
ITGB1-219ENST00000534049 NDNQ99608 321 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms