RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 TRIM33Q9UPN9 1127 aa9.74□□□□□ -0.85
CHKA-207ENST00000533728 DNAJC16Q9Y2G8 782 aa9.74□□□□□ -0.85
CHKA-207ENST00000533728 ACOT9Q9Y305 439 aa9.74□□□□□ -0.85
CHKA-207ENST00000533728 NOTCH2Q04721 2471 aa9.74□□□□□ -0.85
CHKA-207ENST00000533728 CCDC195A0A1B0GUA6 201 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 LOC285095A0A1B0GVY8 99 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 TMEM8BA6NDV4 472 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 MROH6A6NGR9 719 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 SLC38A8A6NNN8 435 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 TARM1B6A8C7 271 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 SPECC1L-ADORA2AF8WAN1 911 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 ZNF195O14628 629 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 SLC30A4O14863 429 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 GYG2O15488 501 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 NPHS1O60500 1241 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 PRAMEF11O60813 436 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 RAMP2O60895 175 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 VNN2O95498 520 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 MOCS2O96007 188 aaPredicted RBP9.73□□□□□ -0.85
CHKA-207ENST00000533728 MT-CYBP00156 380 aaPredicted RBP9.73□□□□□ -0.85
CHKA-207ENST00000533728 AHSGP02765 367 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 FGF1P05230 155 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 CPB1P15086 417 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 STMN1P16949 149 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 TPH1P17752 444 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 PSMA3P25788 255 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 ARNTP27540 789 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 LEPRP48357 1165 aaKnown RBP9.73□□□□□ -0.85
CHKA-207ENST00000533728 PPP3CCP48454 512 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 NUMBP49757 651 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 DNAJB13P59910 316 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 RAB10P61026 200 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 MSLNQ13421 630 aaPredicted RBP9.73□□□□□ -0.85
CHKA-207ENST00000533728 TUBB3Q13509 450 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 SERINC3Q13530 473 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 USP10Q14694 798 aaKnown RBP9.73□□□□□ -0.85
CHKA-207ENST00000533728 RFTN1Q14699 578 aaPredicted RBP9.73□□□□□ -0.85
CHKA-207ENST00000533728 GRM3Q14832 879 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 CMPK2Q5EBM0 449 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 RABGAP1LQ5R372 815 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 C10orf120Q5SQS8 335 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 TSTD2Q5T7W7 516 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 TPGS2Q68CL5 300 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 CWF19L1Q69YN2 538 aaKnown RBP9.73□□□□□ -0.85
CHKA-207ENST00000533728 FBXL22Q6P050 247 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 CHST9Q7L1S5 443 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 GPR65Q8IYL9 337 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 BBS5Q8N3I7 341 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 ATAD1Q8NBU5 361 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 SMRP1Q8NCR6 262 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 SP7Q8TDD2 431 aaPredicted RBP9.73□□□□□ -0.85
CHKA-207ENST00000533728 USP33Q8TEY7 942 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 AGAP11Q8TF27 550 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 ZNF689Q96CS4 500 aaPredicted RBP9.73□□□□□ -0.85
CHKA-207ENST00000533728 HMCESQ96FZ2 354 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 ZNF419Q96HQ0 510 aaPredicted RBP9.73□□□□□ -0.85
CHKA-207ENST00000533728 ZNF778Q96MU6 729 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 CADM1Q9BY67 442 aaKnown RBP9.73□□□□□ -0.85
CHKA-207ENST00000533728 C20orf27Q9GZN8 174 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 DRC3Q9H069 523 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 CDH19Q9H159 772 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 DCLRE1BQ9H816 532 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 RNPEPL1Q9HAU8 725 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 FBXO6Q9NRD1 293 aaPredicted RBP9.73□□□□□ -0.85
CHKA-207ENST00000533728 NDFIP2Q9NV92 336 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 MPP6Q9NZW5 540 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 VTI1BQ9UEU0 232 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 DNMT3LQ9UJW3 386 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 FBXO5Q9UKT4 447 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 STK38LQ9Y2H1 464 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 RAP2CQ9Y3L5 183 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 NUMBLQ9Y6R0 609 aa9.73□□□□□ -0.85
CHKA-207ENST00000533728 MTCL1Q9Y4B5 1905 aaKnown RBP9.73□□□□□ -0.85
CHKA-207ENST00000533728 FAM95CA0A1B0GW59 222 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 SLC12A8A0AV02 714 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 CCDC189A1A4V9 331 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 F5H5T6 163 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 F8W8V4 182 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 H3BNC9 293 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 LINC01565O15544 149 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 PI15O43692 258 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 ITM2AO43736 263 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 ACSL4O60488 711 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 PEX11AO75192 247 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 PMPCBO75439 489 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 LATS1O95835 1130 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 PENKP01210 267 aaPredicted RBP9.72□□□□□ -0.85
CHKA-207ENST00000533728 MMP2P08253 660 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 SLC35E2BP0CK96 405 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 TACR2P21452 398 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 GPR15P49685 360 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 CDH4P55283 916 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 NSUN2Q08J23 767 aaKnown RBP eCLIP9.72□□□□□ -0.85
CHKA-207ENST00000533728 GALNT1Q10472 559 aaPredicted RBP9.72□□□□□ -0.85
CHKA-207ENST00000533728 PRKAA1Q13131 559 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 ITGA9Q13797 1035 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 POU6F1Q14863 301 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 POLD3Q15054 466 aaPredicted RBP9.72□□□□□ -0.85
CHKA-207ENST00000533728 PSMD5Q16401 504 aa9.72□□□□□ -0.85
CHKA-207ENST00000533728 USP41Q3LFD5 358 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms