RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 GPR17Q13304 367 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 GALNT3Q14435 633 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 SEMA3AQ14563 771 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 ACAP2Q15057 778 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 ZRSR2Q15696 482 aaKnown RBP15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 PARP15Q460N3 678 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 EP400NLQ6ZTU2 488 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 DBF4BQ8NFT6 615 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 BLOC1S5Q8TDH9 187 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 GATA6Q92908 595 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 DNAJC1Q96KC8 554 aaKnown RBP15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 CDRT15Q96T59 188 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 FRMPD3Q5JV73 1810 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 PLXNA3P51805 1871 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 STX16-NPEPL1H3BU86 382 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 UBFD1O14562 309 aaKnown RBP15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 PRAMEF11O60813 436 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 ALDH2P05091 517 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 TACR2P21452 398 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 SLC6A4P31645 630 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 KPNA2P52292 529 aaKnown RBP15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 THOP1P52888 689 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 ZNF549Q6P9A3 640 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 GALNT7Q86SF2 657 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 ISCA2Q86U28 154 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 ABI1Q8IZP0 508 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 PELI3Q8N2H9 469 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 SLC43A3Q8NBI5 491 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 OR13C4Q8NGS5 318 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 SPPL2BQ8TCT7 592 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 JADE3Q92613 823 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 POLR1EQ9GZS1 481 aaKnown RBP15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 ALG9Q9H6U8 611 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 PDFQ9HBH1 243 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 DLGAP2Q9P1A6 1054 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 STK39Q9UEW8 545 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 VWA8A3KMH1 1905 aa15.4■□□□□ 0.06
CACNA1E-208ENST00000533229 TCAF2A6NFQ2 919 aa15.39■□□□□ 0.05
CACNA1E-208ENST00000533229 MOXD2PA6NHM9 499 aa15.39■□□□□ 0.05
CACNA1E-208ENST00000533229 SLC22A2O15244 555 aa15.39■□□□□ 0.05
CACNA1E-208ENST00000533229 GOT2P00505 430 aaKnown RBP15.39■□□□□ 0.05
CACNA1E-208ENST00000533229 ZDHHC11BP0C7U3 371 aa15.39■□□□□ 0.05
CACNA1E-208ENST00000533229 RAG1P15918 1043 aa15.39■□□□□ 0.05
CACNA1E-208ENST00000533229 ATF6P18850 670 aa15.39■□□□□ 0.05
CACNA1E-208ENST00000533229 TSPAN8P19075 237 aa15.39■□□□□ 0.05
CACNA1E-208ENST00000533229 RING1Q06587 406 aa15.39■□□□□ 0.05
CACNA1E-208ENST00000533229 PPP1R3AQ16821 1122 aa15.39■□□□□ 0.05
CACNA1E-208ENST00000533229 TCTN1Q2MV58 587 aa15.39■□□□□ 0.05
CACNA1E-208ENST00000533229 ARMC3Q5W041 872 aa15.39■□□□□ 0.05
CACNA1E-208ENST00000533229 LHX8Q68G74 356 aa15.39■□□□□ 0.05
CACNA1E-208ENST00000533229 FUT10Q6P4F1 479 aa15.39■□□□□ 0.05
CACNA1E-208ENST00000533229 CUZD1Q86UP6 607 aa15.39■□□□□ 0.05
CACNA1E-208ENST00000533229 RNF148Q8N7C7 305 aa15.39■□□□□ 0.05
CACNA1E-208ENST00000533229 HMGCLL1Q8TB92 370 aa15.39■□□□□ 0.05
CACNA1E-208ENST00000533229 USP13Q92995 863 aaPredicted RBP15.39■□□□□ 0.05
CACNA1E-208ENST00000533229 SPATA17Q96L03 361 aa15.39■□□□□ 0.05
CACNA1E-208ENST00000533229 STARD7Q9NQZ5 370 aa15.39■□□□□ 0.05
CACNA1E-208ENST00000533229 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.39■□□□□ 0.05
CACNA1E-208ENST00000533229 CFLARO15519 480 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 RBP1P09455 135 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 PRSS56P0CW18 603 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 PEX2P28328 305 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 ADSLP30566 484 aaPredicted RBP15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 PKNOX1P55347 436 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 YBEYP58557 167 aaPredicted RBP15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 ACVR1Q04771 509 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 CEACAM7Q14002 265 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 ZNF423Q2M1K9 1284 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 SFT2D3Q587I9 215 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 PIGGQ5H8A4 983 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 KLC3Q6P597 504 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 PRSS55Q6UWB4 352 aaPredicted RBP15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 LRRC8DQ7L1W4 858 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 LGI2Q8N0V4 545 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 CEP70Q8NHQ1 597 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 PTERQ96BW5 349 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 TSPAN17Q96FV3 270 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 NPAS2Q99743 824 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 GSTO2Q9H4Y5 243 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 SRRDQ9UH36 339 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 PCDHB7Q9Y5E2 793 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 CCDC162PA2VCL2 907 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 TRPC5OSA6NMA1 111 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 ADAM12O43184 909 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 AOC2O75106 756 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 ALDH1A1P00352 501 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 SLC4A1P02730 911 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 ENO3P13929 434 aaPredicted RBP15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 XRCC1P18887 633 aaPredicted RBP15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 HOXD9P28356 352 aaPredicted RBP15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 MAPKAPK2P49137 400 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 MS4A2Q01362 244 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 C16orf89Q6UX73 402 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 CYHR1Q6ZMK1 362 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 OR7D4Q8NG98 312 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 BCL7CQ8WUZ0 217 aaPredicted RBP15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 IFT43Q96FT9 208 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 EBF3Q9H4W6 596 aa15.38■□□□□ 0.05
CACNA1E-208ENST00000533229 POLR3BQ9NW08 1133 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms