RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 MSNP26038 577 aaKnown RBP12.04□□□□□ -0.48
SSBP3-214ENST00000533209 AKT2P31751 481 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 VIPR1P32241 457 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 GRIA4P48058 902 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 LIG3P49916 1009 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 RPL26P61254 145 aaKnown RBP12.04□□□□□ -0.48
SSBP3-214ENST00000533209 SGCGQ13326 291 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 OASLQ15646 514 aaKnown RBP12.04□□□□□ -0.48
SSBP3-214ENST00000533209 ANKRD20A2Q5SQ80 823 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 ANKRD20A1Q5TYW2 823 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 ANKRD20A3Q5VUR7 823 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 KDELC1Q6UW63 502 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 RASGEF1CQ8N431 466 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 FAM71DQ8N9W8 422 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 C12orf50Q8NA57 414 aaPredicted RBP12.04□□□□□ -0.48
SSBP3-214ENST00000533209 C1orf54Q8WWF1 131 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 SCRN2Q96FV2 425 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 OXNAD1Q96HP4 312 aaPredicted RBP12.04□□□□□ -0.48
SSBP3-214ENST00000533209 PBKQ96KB5 322 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 SPATA13Q96N96 652 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 LENG8Q96PV6 779 aaPredicted RBP12.04□□□□□ -0.48
SSBP3-214ENST00000533209 FCRL5Q96RD9 977 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 WDR24Q96S15 920 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 KLF6Q99612 283 aaPredicted RBP12.04□□□□□ -0.48
SSBP3-214ENST00000533209 MYOCQ99972 504 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 GORASP1Q9BQQ3 440 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 TMEM121Q9BTD3 319 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 FRMD8P1Q9BZ68 369 aaPredicted RBP12.04□□□□□ -0.48
SSBP3-214ENST00000533209 GBA3Q9H227 469 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 FZD3Q9NPG1 666 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 FAM153AQ9UHL3 310 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 RSPH14Q9UHP6 348 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 RPL26L1Q9UNX3 145 aaKnown RBP12.04□□□□□ -0.48
SSBP3-214ENST00000533209 COQ6Q9Y2Z9 468 aa12.04□□□□□ -0.48
SSBP3-214ENST00000533209 A0A0J9YYE9 177 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 A0A0U1RQS6 177 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 C5orf60A6NFR6 353 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 ARHGAP33O14559 1287 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 VILLO15195 856 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 OPHN1O60890 802 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 PMPCBO75439 489 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 TM7SF2O76062 418 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 STK10O94804 968 aaKnown RBP12.03□□□□□ -0.48
SSBP3-214ENST00000533209 TRBC1P01850 177 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 ALPIP09923 528 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 CYP2A6P11509 494 aaPredicted RBP12.03□□□□□ -0.48
SSBP3-214ENST00000533209 C6P13671 934 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 ENGP17813 658 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 GM2AP17900 193 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 LHCGRP22888 699 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 CD38P28907 300 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 HNF1BP35680 557 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 EPHB1P54762 984 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 GDF10P55107 478 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 CLDN2P57739 230 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 GNG11P61952 73 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 CDK18Q07002 472 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 GRIK2Q13002 908 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 SNX1Q13596 522 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 AGERQ15109 404 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 TEAD4Q15561 434 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 CNGA3Q16281 694 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 PCSK7Q16549 785 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 CCNG2Q16589 344 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 QPCTQ16769 361 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 LONRF2Q1L5Z9 754 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 AASDHQ4L235 1098 aaPredicted RBP12.03□□□□□ -0.48
SSBP3-214ENST00000533209 GCNT7Q6ZNI0 430 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 USP45Q70EL2 814 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 KDELC2Q7Z4H8 507 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 TSPAN33Q86UF1 283 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 CBARPQ8N350 705 aaPredicted RBP12.03□□□□□ -0.48
SSBP3-214ENST00000533209 C17orf53Q8N3J3 647 aaPredicted RBP12.03□□□□□ -0.48
SSBP3-214ENST00000533209 DENND6BQ8NEG7 585 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 LPCAT1Q8NF37 534 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 CCDC110Q8TBZ0 833 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 COG1Q8WTW3 980 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 MAIP1Q8WWC4 291 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 CENPTQ96BT3 561 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 RTP4Q96DX8 246 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 BMFQ96LC9 184 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 OSBPL9Q96SU4 736 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 EDEM2Q9BV94 578 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 UBP1Q9NZI7 540 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 TTC7AQ9ULT0 858 aaPredicted RBP12.03□□□□□ -0.48
SSBP3-214ENST00000533209 SNX12Q9UMY4 172 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 ANKRD6Q9Y2G4 727 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 DMXL1Q9Y485 3027 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 CACNA1EQ15878 2313 aa12.03□□□□□ -0.48
SSBP3-214ENST00000533209 POM121BA6NF01 834 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 CAPN8A6NHC0 703 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 ANKRD66B4E2M5 251 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 H0Y8X5 98 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 CDX4O14627 284 aaPredicted RBP12.02□□□□□ -0.49
SSBP3-214ENST00000533209 GCATO75600 419 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 RECQL5O94762 991 aaPredicted RBP12.02□□□□□ -0.49
SSBP3-214ENST00000533209 HEXIM1O94992 359 aaKnown RBP12.02□□□□□ -0.49
SSBP3-214ENST00000533209 SYPP08247 313 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 ELFN1P0C7U0 828 aa12.02□□□□□ -0.49
SSBP3-214ENST00000533209 NFKBIAP25963 317 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms