RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 HLA-DRAP01903 254 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 ETS1P14921 441 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 XRCC1P18887 633 aaPredicted RBP6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 RABGGTBP53611 331 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 TMBIM6P55061 237 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 ABCE1P61221 599 aaKnown RBP6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 TOP3AQ13472 1001 aaPredicted RBP6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 NAB1Q13506 487 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 ALCAMQ13740 583 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 RAB39AQ14964 217 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 PCSK7Q16549 785 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 TNFAIP8L3Q5GJ75 292 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 SYCE2Q6PIF2 218 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 PLEKHG7Q6ZR37 379 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 STK32CQ86UX6 486 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 OFCC1Q8IZS5 231 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 TMEM35BQ8NCS4 154 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 OR5B17Q8NGF7 314 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 UBA3Q8TBC4 463 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 GPR152Q8TDT2 470 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 AUTS2Q8WXX7 1259 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 MTERF3Q96E29 417 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 VMP1Q96GC9 406 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 CDT1Q9H211 546 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 CACNA2D2Q9NY47 1150 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 USE1Q9NZ43 259 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 PCSK1NQ9UHG2 260 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 GTF2IRD1Q9UHL9 959 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 SPTBN2O15020 2390 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 ZNF831Q5JPB2 1677 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 FER1L6Q2WGJ9 1857 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 MAGEB16A2A368 324 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 GRXCR1A8MXD5 290 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 MRASO14807 208 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 KLF11O14901 512 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 KPNA6O60684 536 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 H2AFYO75367 372 aaKnown RBP6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 F2P00734 622 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 CKMT2P17540 419 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 BRCC3P46736 316 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 TRAP1Q12931 704 aaKnown RBP6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 NFE2Q16621 373 aaPredicted RBP6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 ZIK1Q3SY52 487 aaPredicted RBP6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 TFDP3Q5H9I0 405 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 MAMDC4Q6UXC1 1216 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 FRMD7Q6ZUT3 714 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 EFL1Q7Z2Z2 1120 aaKnown RBP6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 RAVER1Q8IY67 606 aaKnown RBP6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 DNAJC5GQ8N7S2 189 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 OR8H1Q8NGG4 311 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 FBXO27Q8NI29 283 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 ENKURQ8TC29 256 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 SPATA18Q8TC71 538 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 ACTL9Q8TC94 416 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 PXYLP1Q8TE99 480 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 FAR1Q8WVX9 515 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 WNT8BQ93098 351 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 PHF21AQ96BD5 680 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 MARK4Q96L34 752 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 TBATAQ96M53 351 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 KCTD14Q9BQ13 255 aaPredicted RBP6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 MKRN2Q9H000 416 aaKnown RBP6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 CPNE5Q9HCH3 593 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 CD320Q9NPF0 282 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 AAASQ9NRG9 546 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 SLC38A7Q9NVC3 462 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 PNPOQ9NVS9 261 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 NSMCE4AQ9NXX6 385 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 HCSTQ9UBK5 93 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 RAPGEFL1Q9UHV5 662 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 MKL2Q9ULH7 1088 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 PCDHGC3Q9UN70 934 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 TTC28Q96AY4 2481 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 A0A1B0GW55 424 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 A6NL46 340 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 H3BMQ9 156 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 KCNN4O15554 427 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 ZW10O43264 779 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 TLL1O43897 1013 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 ARHGEF15O94989 841 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 THP07101 528 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 ADRB2P07550 413 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 HOXC6P09630 235 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 DUX4L2P0CJ85 424 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 DUX4L3P0CJ86 424 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 DUX4L4P0CJ87 422 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 DUX4L5P0CJ88 424 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 DUX4L6P0CJ89 424 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 DUX4L7P0CJ90 424 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 DARSP14868 501 aaKnown RBP6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 CYP11B1P15538 503 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 RPL17P18621 184 aaKnown RBP6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 ATF6P18850 670 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 HPCAL1P37235 193 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 RECQLP46063 649 aaPredicted RBP6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 GJA9P57773 515 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 UBE3AQ05086 875 aa6.82□□□□□ -1.32
TGFBR3-209ENST00000532540 SLC18A2Q05940 514 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms