RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 NBPF7P0C2Y1 421 aaPredicted RBP4.27□□□□□ -1.73
PTPRK-220ENST00000531466 DSCR10P59022 87 aa4.27□□□□□ -1.73
PTPRK-220ENST00000531466 KRT72Q14CN4 511 aa4.27□□□□□ -1.73
PTPRK-220ENST00000531466 CCDC181Q5TID7 509 aa4.27□□□□□ -1.73
PTPRK-220ENST00000531466 ZNF852Q6ZMS4 543 aa4.27□□□□□ -1.73
PTPRK-220ENST00000531466 KCTD8Q6ZWB6 473 aa4.27□□□□□ -1.73
PTPRK-220ENST00000531466 STXBP4Q6ZWJ1 553 aa4.27□□□□□ -1.73
PTPRK-220ENST00000531466 ATG16L2Q8NAA4 619 aa4.27□□□□□ -1.73
PTPRK-220ENST00000531466 KLHDC9Q8NEP7 349 aa4.27□□□□□ -1.73
PTPRK-220ENST00000531466 C17orf75Q9HAS0 396 aa4.27□□□□□ -1.73
PTPRK-220ENST00000531466 FAM118AQ9NWS6 357 aa4.27□□□□□ -1.73
PTPRK-220ENST00000531466 CISD1Q9NZ45 108 aaKnown RBP4.27□□□□□ -1.73
PTPRK-220ENST00000531466 ADGRF5Q8IZF2 1346 aa4.26□□□□□ -1.73
PTPRK-220ENST00000531466 KRTAP16-1A8MUX0 517 aa4.26□□□□□ -1.73
PTPRK-220ENST00000531466 GOLGA8FQ08AF8 430 aa4.26□□□□□ -1.73
PTPRK-220ENST00000531466 GALNT1Q10472 559 aaPredicted RBP4.26□□□□□ -1.73
PTPRK-220ENST00000531466 RUNX2Q13950 521 aa4.26□□□□□ -1.73
PTPRK-220ENST00000531466 KCNT1Q5JUK3 1230 aa4.26□□□□□ -1.73
PTPRK-220ENST00000531466 IL31Q6EBC2 164 aa4.26□□□□□ -1.73
PTPRK-220ENST00000531466 SLC35E4Q6ICL7 350 aa4.26□□□□□ -1.73
PTPRK-220ENST00000531466 KMT5CQ86Y97 462 aa4.26□□□□□ -1.73
PTPRK-220ENST00000531466 GJC3Q8NFK1 279 aa4.26□□□□□ -1.73
PTPRK-220ENST00000531466 CSGALNACT1Q8TDX6 532 aa4.26□□□□□ -1.73
PTPRK-220ENST00000531466 DUSP19Q8WTR2 217 aa4.26□□□□□ -1.73
PTPRK-220ENST00000531466 GOLGA1Q92805 767 aa4.26□□□□□ -1.73
PTPRK-220ENST00000531466 RNFT2Q96EX2 444 aa4.26□□□□□ -1.73
PTPRK-220ENST00000531466 CDCA5Q96FF9 252 aa4.26□□□□□ -1.73
PTPRK-220ENST00000531466 ARFGAP3Q9NP61 516 aa4.26□□□□□ -1.73
PTPRK-220ENST00000531466 HSPB2A8KAH6 182 aa4.25□□□□□ -1.73
PTPRK-220ENST00000531466 ITGAXP20702 1163 aa4.25□□□□□ -1.73
PTPRK-220ENST00000531466 PDIA3P30101 505 aaKnown RBP4.25□□□□□ -1.73
PTPRK-220ENST00000531466 RYKP34925 604 aa4.25□□□□□ -1.73
PTPRK-220ENST00000531466 HNF1BP35680 557 aa4.25□□□□□ -1.73
PTPRK-220ENST00000531466 SERPINF1P36955 418 aa4.25□□□□□ -1.73
PTPRK-220ENST00000531466 SMAD1Q15797 465 aaKnown RBP4.25□□□□□ -1.73
PTPRK-220ENST00000531466 HSPB2Q16082 182 aa4.25□□□□□ -1.73
PTPRK-220ENST00000531466 BSPRYQ5W0U4 402 aa4.25□□□□□ -1.73
PTPRK-220ENST00000531466 ABTB1Q969K4 478 aaPredicted RBP4.25□□□□□ -1.73
PTPRK-220ENST00000531466 RBM17Q96I25 401 aaKnown RBP4.25□□□□□ -1.73
PTPRK-220ENST00000531466 TNIP3Q96KP6 325 aa4.25□□□□□ -1.73
PTPRK-220ENST00000531466 PSMD1Q99460 953 aa4.25□□□□□ -1.73
PTPRK-220ENST00000531466 LRRC1Q9BTT6 524 aa4.25□□□□□ -1.73
PTPRK-220ENST00000531466 TTC12Q9H892 705 aaPredicted RBP4.25□□□□□ -1.73
PTPRK-220ENST00000531466 CNGB3Q9NQW8 809 aa4.25□□□□□ -1.73
PTPRK-220ENST00000531466 HCFC1R1Q9NWW0 138 aa4.25□□□□□ -1.73
PTPRK-220ENST00000531466 TINAGQ9UJW2 476 aa4.25□□□□□ -1.73
PTPRK-220ENST00000531466 PCDHGB5Q9Y5G0 923 aa4.25□□□□□ -1.73
PTPRK-220ENST00000531466 PRSS21Q9Y6M0 314 aa4.25□□□□□ -1.73
PTPRK-220ENST00000531466 HMX3A6NHT5 357 aa4.24□□□□□ -1.73
PTPRK-220ENST00000531466 KLRF2D3W0D1 207 aa4.24□□□□□ -1.73
PTPRK-220ENST00000531466 BLOC1S5-TXNDC5H3BN57 136 aa4.24□□□□□ -1.73
PTPRK-220ENST00000531466 DHX16O60231 1041 aaKnown RBP4.24□□□□□ -1.73
PTPRK-220ENST00000531466 SKAP2O75563 359 aaPredicted RBP4.24□□□□□ -1.73
PTPRK-220ENST00000531466 PAX1P15863 534 aa4.24□□□□□ -1.73
PTPRK-220ENST00000531466 RXRAP19793 462 aa4.24□□□□□ -1.73
PTPRK-220ENST00000531466 GPTP24298 496 aa4.24□□□□□ -1.73
PTPRK-220ENST00000531466 USP8P40818 1118 aa4.24□□□□□ -1.73
PTPRK-220ENST00000531466 CSRP3P50461 194 aa4.24□□□□□ -1.73
PTPRK-220ENST00000531466 NEK3P51956 506 aa4.24□□□□□ -1.73
PTPRK-220ENST00000531466 BTKQ06187 659 aa4.24□□□□□ -1.73
PTPRK-220ENST00000531466 SLC18A3Q16572 532 aa4.24□□□□□ -1.73
PTPRK-220ENST00000531466 CTF1Q16619 201 aa4.24□□□□□ -1.73
PTPRK-220ENST00000531466 MMEL1Q495T6 779 aa4.24□□□□□ -1.73
PTPRK-220ENST00000531466 IL20RBQ6UXL0 311 aa4.24□□□□□ -1.73
PTPRK-220ENST00000531466 WDR63Q8IWG1 891 aa4.24□□□□□ -1.73
PTPRK-220ENST00000531466 MASTLQ96GX5 879 aa4.24□□□□□ -1.73
PTPRK-220ENST00000531466 TAF1DQ9H5J8 278 aaPredicted RBP4.24□□□□□ -1.73
PTPRK-220ENST00000531466 G6PC2Q9NQR9 355 aa4.24□□□□□ -1.73
PTPRK-220ENST00000531466 MCM9Q9NXL9 1143 aa4.24□□□□□ -1.73
PTPRK-220ENST00000531466 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.24□□□□□ -1.73
PTPRK-220ENST00000531466 PADI1Q9ULC6 663 aa4.24□□□□□ -1.73
PTPRK-220ENST00000531466 A3GALT2U3KPV4 340 aa4.24□□□□□ -1.73
PTPRK-220ENST00000531466 A0A087WV62 115 aa4.23□□□□□ -1.73
PTPRK-220ENST00000531466 A0A0U1RQF3 1178 aa4.23□□□□□ -1.73
PTPRK-220ENST00000531466 ACKR2O00590 384 aa4.23□□□□□ -1.73
PTPRK-220ENST00000531466 INHBAP08476 426 aa4.23□□□□□ -1.73
PTPRK-220ENST00000531466 ZNF8P17098 575 aaPredicted RBP4.23□□□□□ -1.73
PTPRK-220ENST00000531466 GNL1P36915 607 aaPredicted RBP4.23□□□□□ -1.73
PTPRK-220ENST00000531466 LUMP51884 338 aaPredicted RBP4.23□□□□□ -1.73
PTPRK-220ENST00000531466 SEC61BP60468 96 aaKnown RBP4.23□□□□□ -1.73
PTPRK-220ENST00000531466 NEDD9Q14511 834 aa4.23□□□□□ -1.73
PTPRK-220ENST00000531466 HLTFQ14527 1009 aaKnown RBP eCLIP4.23□□□□□ -1.73
PTPRK-220ENST00000531466 PDSS1Q5T2R2 415 aa4.23□□□□□ -1.73
PTPRK-220ENST00000531466 RGMBQ6NW40 437 aa4.23□□□□□ -1.73
PTPRK-220ENST00000531466 PGBD2Q6P3X8 592 aa4.23□□□□□ -1.73
PTPRK-220ENST00000531466 PRSS45Q7RTY3 260 aa4.23□□□□□ -1.73
PTPRK-220ENST00000531466 NOTCH2NLQ7Z3S9 236 aa4.23□□□□□ -1.73
PTPRK-220ENST00000531466 TICAM2Q86XR7 235 aa4.23□□□□□ -1.73
PTPRK-220ENST00000531466 FOXRED2Q8IWF2 684 aa4.23□□□□□ -1.73
PTPRK-220ENST00000531466 CHERPQ8IWX8 916 aaKnown RBP4.23□□□□□ -1.73
PTPRK-220ENST00000531466 ZC3HAV1LQ96H79 300 aaKnown RBP4.23□□□□□ -1.73
PTPRK-220ENST00000531466 ZNF354BQ96LW1 612 aa4.23□□□□□ -1.73
PTPRK-220ENST00000531466 UBXN6Q9BZV1 441 aa4.23□□□□□ -1.73
PTPRK-220ENST00000531466 PCDH9Q9HC56 1237 aa4.23□□□□□ -1.73
PTPRK-220ENST00000531466 TMEM30AQ9NV96 361 aa4.23□□□□□ -1.73
PTPRK-220ENST00000531466 ARID4BQ4LE39 1312 aaPredicted RBP4.22□□□□□ -1.73
PTPRK-220ENST00000531466 CBY3A6NI87 242 aa4.22□□□□□ -1.73
PTPRK-220ENST00000531466 PCDH7O60245 1069 aa4.22□□□□□ -1.73
PTPRK-220ENST00000531466 MTA2O94776 668 aa4.22□□□□□ -1.73
PTPRK-220ENST00000531466 S1PR1P21453 382 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms