RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 FASTKD5Q7L8L6 764 aaKnown RBP6.15□□□□□ -1.42
CASP4-208ENST00000530309 IRF2BP2Q7Z5L9 587 aa6.15□□□□□ -1.42
CASP4-208ENST00000530309 ARHGAP12Q8IWW6 846 aa6.15□□□□□ -1.42
CASP4-208ENST00000530309 SLC35F3Q8IY50 421 aa6.15□□□□□ -1.42
CASP4-208ENST00000530309 BEST2Q8NFU1 509 aa6.15□□□□□ -1.42
CASP4-208ENST00000530309 VCPIP1Q96JH7 1222 aa6.15□□□□□ -1.42
CASP4-208ENST00000530309 SLITRK1Q96PX8 696 aa6.15□□□□□ -1.42
CASP4-208ENST00000530309 SDF4Q9BRK5 362 aa6.15□□□□□ -1.42
CASP4-208ENST00000530309 POLR1BQ9H9Y6 1135 aa6.15□□□□□ -1.42
CASP4-208ENST00000530309 DLGAP2Q9P1A6 1054 aa6.15□□□□□ -1.42
CASP4-208ENST00000530309 BECN2A8MW95 431 aa6.14□□□□□ -1.43
CASP4-208ENST00000530309 AP3D1O14617 1153 aa6.14□□□□□ -1.43
CASP4-208ENST00000530309 HNRNPCL1O60812 293 aaKnown RBP6.14□□□□□ -1.43
CASP4-208ENST00000530309 NDUFB4O95168 129 aa6.14□□□□□ -1.43
CASP4-208ENST00000530309 IPO7O95373 1038 aaKnown RBP6.14□□□□□ -1.43
CASP4-208ENST00000530309 LCATP04180 440 aa6.14□□□□□ -1.43
CASP4-208ENST00000530309 RARGP13631 454 aa6.14□□□□□ -1.43
CASP4-208ENST00000530309 KRT10P13645 584 aa6.14□□□□□ -1.43
CASP4-208ENST00000530309 HOXB2P14652 356 aa6.14□□□□□ -1.43
CASP4-208ENST00000530309 CHATP28329 748 aa6.14□□□□□ -1.43
CASP4-208ENST00000530309 TM4SF1P30408 202 aa6.14□□□□□ -1.43
CASP4-208ENST00000530309 PPARGP37231 505 aaPredicted RBP6.14□□□□□ -1.43
CASP4-208ENST00000530309 RFX5P48382 616 aaPredicted RBP6.14□□□□□ -1.43
CASP4-208ENST00000530309 NIPAL4Q0D2K0 466 aa6.14□□□□□ -1.43
CASP4-208ENST00000530309 PDE1CQ14123 709 aaPredicted RBP6.14□□□□□ -1.43
CASP4-208ENST00000530309 DNTTIP2Q5QJE6 756 aaKnown RBP6.14□□□□□ -1.43
CASP4-208ENST00000530309 LINGO2Q7L985 606 aa6.14□□□□□ -1.43
CASP4-208ENST00000530309 TTC39CQ8N584 583 aa6.14□□□□□ -1.43
CASP4-208ENST00000530309 HUS1BQ8NHY5 278 aa6.14□□□□□ -1.43
CASP4-208ENST00000530309 SCFD2Q8WU76 684 aa6.14□□□□□ -1.43
CASP4-208ENST00000530309 ZNF570Q96NI8 536 aa6.14□□□□□ -1.43
CASP4-208ENST00000530309 GHITMQ9H3K2 345 aa6.14□□□□□ -1.43
CASP4-208ENST00000530309 DDX4Q9NQI0 724 aaKnown RBP6.14□□□□□ -1.43
CASP4-208ENST00000530309 TMEM51Q9NW97 253 aa6.14□□□□□ -1.43
CASP4-208ENST00000530309 IL36RNQ9UBH0 155 aa6.14□□□□□ -1.43
CASP4-208ENST00000530309 SWAP70Q9UH65 585 aa6.14□□□□□ -1.43
CASP4-208ENST00000530309 FAM237AA0A1B0GTK4 181 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 MYO1GB0I1T2 1018 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 B4DGG1 531 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 H3BNX3 289 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 VWA5AO00534 786 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 ITM2AO43736 263 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 GFPT2O94808 682 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 SOX30O94993 753 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 NAGAP17050 411 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 HOXD13P35453 343 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 RFX2P48378 723 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 PMS2P54278 862 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 MYBPC2Q14324 1141 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 MEA1Q16626 185 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 USP41Q3LFD5 358 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 LEXMQ3ZCV2 418 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 SARM1Q6SZW1 724 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 CCDC129Q6ZRS4 1044 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 WDTC1Q8N5D0 677 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 ZBTB2Q8N680 514 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 POMGNT1Q8WZA1 660 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 VOPP1Q96AW1 172 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 FAM110AQ9BQ89 295 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 FAM234AQ9H0X4 552 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 SYNCQ9H7C4 482 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 CLK4Q9HAZ1 481 aaKnown RBP6.13□□□□□ -1.43
CASP4-208ENST00000530309 TERF2IPQ9NYB0 399 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 CISD1Q9NZ45 108 aaKnown RBP6.13□□□□□ -1.43
CASP4-208ENST00000530309 GPR34Q9UPC5 381 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 CEPT1Q9Y6K0 416 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 SQORQ9Y6N5 450 aa6.13□□□□□ -1.43
CASP4-208ENST00000530309 A6NCN8 305 aa6.12□□□□□ -1.43
CASP4-208ENST00000530309 TNFRSF13BO14836 293 aaPredicted RBP6.12□□□□□ -1.43
CASP4-208ENST00000530309 SPRY3O43610 288 aa6.12□□□□□ -1.43
CASP4-208ENST00000530309 CD58P19256 250 aa6.12□□□□□ -1.43
CASP4-208ENST00000530309 GPTP24298 496 aa6.12□□□□□ -1.43
CASP4-208ENST00000530309 F2RL1P55085 397 aa6.12□□□□□ -1.43
CASP4-208ENST00000530309 PRAMEP78395 509 aa6.12□□□□□ -1.43
CASP4-208ENST00000530309 SORDQ00796 357 aa6.12□□□□□ -1.43
CASP4-208ENST00000530309 ROR2Q01974 943 aaKnown RBP6.12□□□□□ -1.43
CASP4-208ENST00000530309 CXorf66Q5JRM2 361 aaPredicted RBP6.12□□□□□ -1.43
CASP4-208ENST00000530309 C6orf141Q5SZD1 244 aa6.12□□□□□ -1.43
CASP4-208ENST00000530309 FNBP1LQ5T0N5 605 aa6.12□□□□□ -1.43
CASP4-208ENST00000530309 KLHL35Q6PF15 583 aa6.12□□□□□ -1.43
CASP4-208ENST00000530309 QSOX2Q6ZRP7 698 aa6.12□□□□□ -1.43
CASP4-208ENST00000530309 WDR63Q8IWG1 891 aa6.12□□□□□ -1.43
CASP4-208ENST00000530309 MIGA1Q8NAN2 632 aa6.12□□□□□ -1.43
CASP4-208ENST00000530309 SCCPDHQ8NBX0 429 aa6.12□□□□□ -1.43
CASP4-208ENST00000530309 ARRDC2Q8TBH0 407 aa6.12□□□□□ -1.43
CASP4-208ENST00000530309 TRIB2Q92519 343 aa6.12□□□□□ -1.43
CASP4-208ENST00000530309 ERGIC1Q969X5 290 aa6.12□□□□□ -1.43
CASP4-208ENST00000530309 SLC41A2Q96JW4 573 aa6.12□□□□□ -1.43
CASP4-208ENST00000530309 TMEM68Q96MH6 324 aa6.12□□□□□ -1.43
CASP4-208ENST00000530309 CMTM3Q96MX0 182 aa6.12□□□□□ -1.43
CASP4-208ENST00000530309 ZNF48Q96MX3 618 aaPredicted RBP6.12□□□□□ -1.43
CASP4-208ENST00000530309 RBM38Q9H0Z9 239 aaKnown RBP6.12□□□□□ -1.43
CASP4-208ENST00000530309 KAT14Q9H8E8 782 aa6.12□□□□□ -1.43
CASP4-208ENST00000530309 HAUS2Q9NVX0 235 aa6.12□□□□□ -1.43
CASP4-208ENST00000530309 CNOT8Q9UFF9 292 aaKnown RBP6.12□□□□□ -1.43
CASP4-208ENST00000530309 TMEM202A6NGA9 273 aa6.11□□□□□ -1.43
CASP4-208ENST00000530309 PTGES3LE9PB15 166 aa6.11□□□□□ -1.43
CASP4-208ENST00000530309 ASAP2O43150 1006 aa6.11□□□□□ -1.43
CASP4-208ENST00000530309 RGS14O43566 566 aa6.11□□□□□ -1.43
CASP4-208ENST00000530309 NKX2-2O95096 273 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms