RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 PGM5Q15124 567 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 RABEP1Q15276 862 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 CBWD5Q5RIA9 395 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 ZNF354CQ86Y25 554 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 ITPRIPQ8IWB1 547 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 SCN4BQ8IWT1 228 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 LPAR1Q92633 364 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 USP13Q92995 863 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-212ENST00000529046 CUL5Q93034 780 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 KIF1BPQ96EK5 621 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 PIMREGQ9BSJ6 248 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 CRNKL1Q9BZJ0 848 aaKnown RBP5.12□□□□□ -1.59
CSDE1-212ENST00000529046 C11orf49Q9H6J7 331 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 MOV10Q9HCE1 1003 aaKnown RBP5.12□□□□□ -1.59
CSDE1-212ENST00000529046 ATP8A2Q9NTI2 1148 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 ZBTB40Q9NUA8 1239 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 SWAP70Q9UH65 585 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 TNNQ9UQP3 1299 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 RANBP2P49792 3224 aaKnown RBP5.12□□□□□ -1.59
CSDE1-212ENST00000529046 ZBED9Q6R2W3 1325 aa5.12□□□□□ -1.59
CSDE1-212ENST00000529046 MAST2Q6P0Q8 1798 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 SIPA1L1O43166 1804 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 FOCADQ5VW36 1801 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 C17orf100A8MU93 164 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 STX16-NPEPL1H3BU86 382 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 STX16O14662 325 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 CNMDO75829 334 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 CYP2B6P20813 491 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 AVPR2P30518 371 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 SHMT1P34896 483 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 PPM1FP49593 454 aaPredicted RBP5.11□□□□□ -1.59
CSDE1-212ENST00000529046 MVDP53602 400 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 RPS13P62277 151 aaKnown RBP5.11□□□□□ -1.59
CSDE1-212ENST00000529046 DYNLL1P63167 89 aaKnown RBP5.11□□□□□ -1.59
CSDE1-212ENST00000529046 GHRHRQ02643 423 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 TLE2Q04725 743 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 MTA1Q13330 715 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 SLC9C2Q5TAH2 1124 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 MFSD14CQ5VZR4 134 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 FAM109BQ6ICB4 259 aaPredicted RBP5.11□□□□□ -1.59
CSDE1-212ENST00000529046 DENND1BQ6P3S1 775 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 DHRS13Q6UX07 377 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 TMEM179Q6ZVK1 233 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 GALNT7Q86SF2 657 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 PIP4P1Q86T03 277 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 FAM110DQ8TAY7 271 aaPredicted RBP5.11□□□□□ -1.59
CSDE1-212ENST00000529046 PIGOQ8TEQ8 1089 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 TBATAQ96M53 351 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 PPP1R10Q96QC0 940 aaKnown RBP5.11□□□□□ -1.59
CSDE1-212ENST00000529046 REEP2Q9BRK0 252 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 PORCNQ9H237 461 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 NOD2Q9HC29 1040 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 RIC8AQ9NPQ8 531 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 TMEM248Q9NWD8 314 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 NRBP1Q9UHY1 535 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 DDX19BQ9UMR2 479 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 PFASO15067 1338 aa5.11□□□□□ -1.59
CSDE1-212ENST00000529046 A0A1B0GVC2 190 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 VWA3AA6NCI4 1184 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 DNM1LO00429 736 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 PLXNB2O15031 1838 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 TLX3O43711 291 aaPredicted RBP5.1□□□□□ -1.59
CSDE1-212ENST00000529046 METTL18O95568 372 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 SLC25A27O95847 323 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 CD63P08962 238 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 TNNT1P13805 278 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 ITGB6P18564 788 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 COPB2P35606 906 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 ZBTB16Q05516 673 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 LIPMQ5VYY2 423 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 MTFR2Q6P444 385 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 AACSQ86V21 672 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 TMEM200AQ86VY9 491 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 TDHQ8IZJ6 230 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 NANOGP1Q8N7R0 232 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 C9orf106Q8NAJ2 232 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 CEP70Q8NHQ1 597 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 ACER1Q8TDN7 264 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 KAT2BQ92831 832 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 TRIM63Q969Q1 353 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 ZBTB9Q96C00 473 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 HMCESQ96FZ2 354 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 COG8Q96MW5 612 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 ATAD5Q96QE3 1844 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 TMEM79Q9BSE2 394 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 HDHD5Q9BXW7 423 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 FRMD8Q9BZ67 464 aaPredicted RBP5.1□□□□□ -1.59
CSDE1-212ENST00000529046 MROH8Q9H579 483 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 SH2D4AQ9H788 454 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 Q9N2J8 555 aa5.1□□□□□ -1.59
CSDE1-212ENST00000529046 PAPOLBQ9NRJ5 636 aaKnown RBP5.1□□□□□ -1.59
CSDE1-212ENST00000529046 DOCK3Q8IZD9 2030 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 ZNF532Q9HCE3 1301 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 TRBV5-3A0A0A0MS03 114 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 A0A0G2JK05 382 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 A0A1W2PRG0 241 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 ATP2A1O14983 1001 aa5.09□□□□□ -1.59
CSDE1-212ENST00000529046 WDR46O15213 610 aaKnown RBP5.09□□□□□ -1.59
CSDE1-212ENST00000529046 DHX16O60231 1041 aaKnown RBP5.09□□□□□ -1.59
CSDE1-212ENST00000529046 TSPAN3O60637 253 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms