RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 ESCO2Q56NI9 601 aa2.64□□□□□ -1.99
ECHDC1-219ENST00000526299 KCNT1Q5JUK3 1230 aa2.64□□□□□ -1.99
ECHDC1-219ENST00000526299 SLC27A1Q6PCB7 646 aa2.64□□□□□ -1.99
ECHDC1-219ENST00000526299 GJB7Q6PEY0 223 aa2.64□□□□□ -1.99
ECHDC1-219ENST00000526299 KSR2Q6VAB6 950 aa2.64□□□□□ -1.99
ECHDC1-219ENST00000526299 PARP16Q8N5Y8 322 aa2.64□□□□□ -1.99
ECHDC1-219ENST00000526299 ZNF527Q8NB42 609 aa2.64□□□□□ -1.99
ECHDC1-219ENST00000526299 ABTB1Q969K4 478 aaPredicted RBP2.64□□□□□ -1.99
ECHDC1-219ENST00000526299 C17orf77Q96MU5 243 aa2.64□□□□□ -1.99
ECHDC1-219ENST00000526299 LRRC1Q9BTT6 524 aa2.64□□□□□ -1.99
ECHDC1-219ENST00000526299 NPLQ9BXD5 320 aaPredicted RBP2.64□□□□□ -1.99
ECHDC1-219ENST00000526299 RNF215Q9Y6U7 377 aa2.64□□□□□ -1.99
ECHDC1-219ENST00000526299 HHLA1C9JL84 531 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 NDUFB4O95168 129 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 PAX1P15863 534 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 ITGA2P17301 1181 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 PPM1AP35813 382 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 GNL1P36915 607 aaPredicted RBP2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 ITGADQ13349 1161 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 RUNX2Q13950 521 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 GPATCH4Q5T3I0 446 aaKnown RBP2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 STXBP5Q5T5C0 1151 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 CCDC181Q5TID7 509 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 SPINK14Q6IE38 97 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 IL20RBQ6UXL0 311 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 PRSS45Q7RTY3 260 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 HERC6Q8IVU3 1022 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 WDR63Q8IWG1 891 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 KLHDC9Q8NEP7 349 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 CSGALNACT1Q8TDX6 532 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 TMEM170AQ8WVE7 144 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 TNIP3Q96KP6 325 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 SGCZQ96LD1 299 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 C17orf75Q9HAS0 396 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 RPS10P5Q9NQ39 176 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 SLC7A10Q9NS82 523 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 TMEM30AQ9NV96 361 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 PADI1Q9ULC6 663 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 NFE2L3Q9Y4A8 694 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 ADGRF5Q8IZF2 1346 aa2.63□□□□□ -1.99
ECHDC1-219ENST00000526299 SMIM1B2RUZ4 78 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 AKR1B15C9JRZ8 316 aaPredicted RBP2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 KLRF2D3W0D1 207 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 H0Y3Z8 333 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 BLOC1S5-TXNDC5H3BN57 136 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 NR5A2O00482 541 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 EBAG9O00559 213 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 NBPF7P0C2Y1 421 aaPredicted RBP2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 ZNF8P17098 575 aaPredicted RBP2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 GPTP24298 496 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 RYKP34925 604 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 KRT9P35527 623 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 HNF1BP35680 557 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 TERF1P54274 439 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 GOLGA8FQ08AF8 430 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 SLC18A3Q16572 532 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 PPP6R3Q5H9R7 873 aaPredicted RBP2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 SULT6B1Q6IMI4 303 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 RGMBQ6NW40 437 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 SRLQ86TD4 932 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 ZNF34Q8IZ26 560 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 ATG16L2Q8NAA4 619 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 GJC3Q8NFK1 279 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 LINS1Q8NG48 757 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 DUSP19Q8WTR2 217 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 GOLGA1Q92805 767 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 KTI12Q96EK9 354 aaPredicted RBP2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 RBM17Q96I25 401 aaKnown RBP2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 TAF1DQ9H5J8 278 aaPredicted RBP2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 TTC12Q9H892 705 aaPredicted RBP2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 PCDH9Q9HC56 1237 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 CNGB3Q9NQW8 809 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 CISD1Q9NZ45 108 aaKnown RBP2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 OGFRQ9NZT2 677 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 PAK5Q9P286 719 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 TAF1P21675 1872 aa2.62□□□□□ -1.99
ECHDC1-219ENST00000526299 CAVIN2O95810 425 aa2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 INHBAP08476 426 aa2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 USP8P40818 1118 aa2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 GNB1P62873 340 aa2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 BTKQ06187 659 aa2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 GRIK2Q13002 908 aa2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 HLTFQ14527 1009 aaKnown RBP eCLIP2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 ZNF239Q16600 458 aaKnown RBP2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 CTF1Q16619 201 aa2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 EDRF1Q3B7T1 1238 aa2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 SFMBT2Q5VUG0 894 aa2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 TRNP1Q6NT89 227 aa2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 PGBD2Q6P3X8 592 aa2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 ATF7IPQ6VMQ6 1270 aa2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 C15orf39Q6ZRI6 1047 aa2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 NOTCH2NLQ7Z3S9 236 aa2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 RNF113BQ8IZP6 322 aaKnown RBP2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 MAGEC3Q8TD91 643 aa2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 RNFT2Q96EX2 444 aa2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 MASTLQ96GX5 879 aa2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 ZNF354BQ96LW1 612 aa2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 ZNF570Q96NI8 536 aa2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 POLR3CQ9BUI4 534 aaPredicted RBP2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 FKRPQ9H9S5 495 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms