RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 NOD2Q9HC29 1040 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 PCDHGC4Q9Y5F7 938 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 TPP1O14773 563 aa17.14■□□□□ 0.33
SQLE-205ENST00000521232 HNF1BP35680 557 aa17.14■□□□□ 0.33
SQLE-205ENST00000521232 MMP13P45452 471 aa17.14■□□□□ 0.33
SQLE-205ENST00000521232 GALNT2Q10471 571 aa17.14■□□□□ 0.33
SQLE-205ENST00000521232 TBX2Q13207 712 aaPredicted RBP17.14■□□□□ 0.33
SQLE-205ENST00000521232 INPP5AQ14642 412 aa17.14■□□□□ 0.33
SQLE-205ENST00000521232 HES3Q5TGS1 186 aa17.14■□□□□ 0.33
SQLE-205ENST00000521232 MDM1Q8TC05 714 aa17.14■□□□□ 0.33
SQLE-205ENST00000521232 LMX1AQ8TE12 382 aa17.14■□□□□ 0.33
SQLE-205ENST00000521232 APOOQ9BUR5 198 aa17.14■□□□□ 0.33
SQLE-205ENST00000521232 TCEAL2Q9H3H9 227 aaPredicted RBP17.14■□□□□ 0.33
SQLE-205ENST00000521232 SCUBE2Q9NQ36 999 aa17.14■□□□□ 0.33
SQLE-205ENST00000521232 SPASTQ9UBP0 616 aa17.14■□□□□ 0.33
SQLE-205ENST00000521232 SALL4Q9UJQ4 1053 aa17.14■□□□□ 0.33
SQLE-205ENST00000521232 URB1O60287 2271 aaKnown RBP17.14■□□□□ 0.33
SQLE-205ENST00000521232 LY6G6EA0A0G2JKS1 128 aa17.13■□□□□ 0.33
SQLE-205ENST00000521232 MFSD11O43934 449 aa17.13■□□□□ 0.33
SQLE-205ENST00000521232 RECQL5O94762 991 aaPredicted RBP17.13■□□□□ 0.33
SQLE-205ENST00000521232 MTA2O94776 668 aa17.13■□□□□ 0.33
SQLE-205ENST00000521232 GM2AP17900 193 aa17.13■□□□□ 0.33
SQLE-205ENST00000521232 GARSP41250 739 aaKnown RBP17.13■□□□□ 0.33
SQLE-205ENST00000521232 ARHGAP25P42331 645 aa17.13■□□□□ 0.33
SQLE-205ENST00000521232 DUSP3P51452 185 aaPredicted RBP17.13■□□□□ 0.33
SQLE-205ENST00000521232 CLDN6P56747 220 aa17.13■□□□□ 0.33
SQLE-205ENST00000521232 MAXP61244 160 aa17.13■□□□□ 0.33
SQLE-205ENST00000521232 INSM1Q01101 510 aaPredicted RBP17.13■□□□□ 0.33
SQLE-205ENST00000521232 PPARDQ03181 441 aa17.13■□□□□ 0.33
SQLE-205ENST00000521232 TARDBPQ13148 414 aaKnown RBP eCLIP17.13■□□□□ 0.33
SQLE-205ENST00000521232 MTM1Q13496 603 aa17.13■□□□□ 0.33
SQLE-205ENST00000521232 MESDQ14696 234 aa17.13■□□□□ 0.33
SQLE-205ENST00000521232 ZCCHC8Q6NZY4 707 aaKnown RBP17.13■□□□□ 0.33
SQLE-205ENST00000521232 SARM1Q6SZW1 724 aa17.13■□□□□ 0.33
SQLE-205ENST00000521232 CNGA4Q8IV77 575 aa17.13■□□□□ 0.33
SQLE-205ENST00000521232 PHACTR4Q8IZ21 702 aa17.13■□□□□ 0.33
SQLE-205ENST00000521232 RBFAQ8N0V3 343 aa17.13■□□□□ 0.33
SQLE-205ENST00000521232 PAF1Q8N7H5 531 aa17.13■□□□□ 0.33
SQLE-205ENST00000521232 MAML1Q92585 1016 aa17.13■□□□□ 0.33
SQLE-205ENST00000521232 FATE1Q969F0 183 aa17.13■□□□□ 0.33
SQLE-205ENST00000521232 TSGA13Q96PP4 275 aa17.13■□□□□ 0.33
SQLE-205ENST00000521232 SPTLC3Q9NUV7 552 aa17.13■□□□□ 0.33
SQLE-205ENST00000521232 APOBEC3BQ9UH17 382 aaKnown RBP17.13■□□□□ 0.33
SQLE-205ENST00000521232 PHTF1Q9UMS5 762 aa17.13■□□□□ 0.33
SQLE-205ENST00000521232 U3KQA8 63 aa17.13■□□□□ 0.33
SQLE-205ENST00000521232 AKR1B15C9JRZ8 316 aaPredicted RBP17.12■□□□□ 0.33
SQLE-205ENST00000521232 MATN3O15232 486 aa17.12■□□□□ 0.33
SQLE-205ENST00000521232 GCATO75600 419 aa17.12■□□□□ 0.33
SQLE-205ENST00000521232 GP1BAP07359 652 aa17.12■□□□□ 0.33
SQLE-205ENST00000521232 ELFN1P0C7U0 828 aa17.12■□□□□ 0.33
SQLE-205ENST00000521232 MYF5P13349 255 aa17.12■□□□□ 0.33
SQLE-205ENST00000521232 KDELR1P24390 212 aa17.12■□□□□ 0.33
SQLE-205ENST00000521232 CCNCP24863 283 aa17.12■□□□□ 0.33
SQLE-205ENST00000521232 GJC1P36383 396 aa17.12■□□□□ 0.33
SQLE-205ENST00000521232 BLKP51451 505 aa17.12■□□□□ 0.33
SQLE-205ENST00000521232 TRAF2Q12933 501 aa17.12■□□□□ 0.33
SQLE-205ENST00000521232 NFATC4Q14934 902 aa17.12■□□□□ 0.33
SQLE-205ENST00000521232 IFI16Q16666 785 aaKnown RBP17.12■□□□□ 0.33
SQLE-205ENST00000521232 PRRT3Q5FWE3 981 aa17.12■□□□□ 0.33
SQLE-205ENST00000521232 FAXCQ5TGI0 409 aa17.12■□□□□ 0.33
SQLE-205ENST00000521232 TIGD7Q6NT04 549 aaPredicted RBP17.12■□□□□ 0.33
SQLE-205ENST00000521232 RHOT2Q8IXI1 618 aa17.12■□□□□ 0.33
SQLE-205ENST00000521232 CBARPQ8N350 705 aaPredicted RBP17.12■□□□□ 0.33
SQLE-205ENST00000521232 PQLC3Q8N755 202 aa17.12■□□□□ 0.33
SQLE-205ENST00000521232 IL12RB2Q99665 862 aa17.12■□□□□ 0.33
SQLE-205ENST00000521232 SLC13A1Q9BZW2 595 aa17.12■□□□□ 0.33
SQLE-205ENST00000521232 EVA1BQ9NVM1 165 aa17.12■□□□□ 0.33
SQLE-205ENST00000521232 NCKIPSDQ9NZQ3 722 aa17.12■□□□□ 0.33
SQLE-205ENST00000521232 B4GALT6Q9UBX8 382 aa17.12■□□□□ 0.33
SQLE-205ENST00000521232 PPIL1Q9Y3C6 166 aa17.12■□□□□ 0.33
SQLE-205ENST00000521232 A8MX80 341 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 LMO7DNF2Z398 122 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 PCCBP05166 539 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 HOXC4P09017 264 aaPredicted RBP17.11■□□□□ 0.33
SQLE-205ENST00000521232 NFKBIAP25963 317 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 HTR1BP28222 390 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 TRIM23P36406 574 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 HK3P52790 923 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 CYP4F3Q08477 520 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 C1orf61Q13536 156 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 TCEAL1Q15170 157 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 DEFB133Q30KQ1 61 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 ENPP7Q6UWV6 458 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 DCBLD1Q8N8Z6 715 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 PLA2G15Q8NCC3 412 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 PDCD6IPQ8WUM4 868 aaKnown RBP17.11■□□□□ 0.33
SQLE-205ENST00000521232 RAPGEF5Q92565 580 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 SCRN2Q96FV2 425 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 COQ10AQ96MF6 247 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 RNF157Q96PX1 679 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 LRRC61Q9BV99 259 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 BOCQ9BWV1 1114 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 CLPBQ9H078 707 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 NT5MQ9NPB1 228 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 AMACRQ9UHK6 382 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 INTUQ9ULD6 942 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 CLCA2Q9UQC9 943 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 OR1A2Q9Y585 309 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 RP1P56715 2156 aa17.11■□□□□ 0.33
SQLE-205ENST00000521232 NBEAQ8NFP9 2946 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms