RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 CMAHPQ9Y471 501 aa3.44□□□□□ -1.86
RNU6-840P-201ENST00000517275 RAI2Q9Y5P3 530 aa3.44□□□□□ -1.86
RNU6-840P-201ENST00000517275 A0A0G2JK05 382 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 CCDC188H7C350 402 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 RHODO00212 210 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 WNT9BO14905 357 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 FOXN1O15353 648 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 AFPP02771 609 aaKnown RBP3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 TPOP07202 933 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 NHLRC4P0CG21 123 aaPredicted RBP3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 MYBL1P10243 752 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 INSRRP14616 1297 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 IFNAR1P17181 557 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 DDX5P17844 614 aaKnown RBP3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 PROZP22891 400 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 KRT2P35908 639 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 PIK3CAP42336 1068 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 CXCR3P49682 368 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 LIG4P49917 911 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 TAS2R40P59535 323 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 RBP5P82980 135 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 PMPCAQ10713 525 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 IKQ13123 557 aaPredicted RBP3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 PRPF4BQ13523 1007 aaKnown RBP3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 GRAPQ13588 217 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 SNTB1Q13884 538 aaKnown RBP3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 PLCB4Q15147 1175 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 COL28A1Q2UY09 1125 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 ESCO2Q56NI9 601 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 ZNF628Q5EBL2 1059 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 ZNF362Q5T0B9 420 aaPredicted RBP3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 PRAMEF17Q5VTA0 474 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 IGFL4Q6B9Z1 124 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 KRT80Q6KB66 452 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 LCTLQ6UWM7 567 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 RBPMS2Q6ZRY4 209 aaKnown RBP3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 FAM57BQ71RH2 274 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 ZNF627Q7L945 461 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 SPRED1Q7Z699 444 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 GALNT13Q8IUC8 556 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 SLC35F3Q8IY50 421 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 THNSL1Q8IYQ7 743 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 MAML2Q8IZL2 1156 aaPredicted RBP3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 RBFAQ8N0V3 343 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 DPP10Q8N608 796 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 PNLDC1Q8NA58 520 aaKnown RBP3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 FAM98AQ8NCA5 519 aaKnown RBP3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 GJC3Q8NFK1 279 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 GABPB2Q8TAK5 448 aaPredicted RBP3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 ATOH1Q92858 354 aaPredicted RBP3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 TMCO6Q96DC7 493 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 RRNAD1Q96FB5 475 aaKnown RBP3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 DACH2Q96NX9 599 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 SIN3AQ96ST3 1273 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 CDT1Q9H211 546 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 KLK15Q9H2R5 256 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 HRH4Q9H3N8 390 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 MVB12BQ9H7P6 319 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 CPNE5Q9HCH3 593 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 MAGEE1Q9HCI5 957 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 ARGLU1Q9NWB6 273 aaPredicted RBP3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 SELENONQ9NZV5 590 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 CNOT8Q9UFF9 292 aaKnown RBP3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 OSGIN1Q9UJX0 560 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 FBXW11Q9UKB1 542 aa3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 PTRH2Q9Y3E5 179 aaKnown RBP3.43□□□□□ -1.86
RNU6-840P-201ENST00000517275 TRBV5-3A0A0A0MS03 114 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 A0A1B0GVM2 712 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 TRBC2A0A5B9 178 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 DPPA5A6NC42 116 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 GAGE12JA6NER3 117 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 A8MV72 311 aaPredicted RBP3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 ADAMDEC1O15204 470 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 PRPF4O43172 522 aaKnown RBP eCLIP3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 TBCAO75347 108 aaKnown RBP3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 AVILO75366 819 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 NKX2-2O95096 273 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 CLDN7O95471 211 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 GCP02774 474 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 FYNP06241 537 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 ABCB1P08183 1280 aaPredicted RBP3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 CCDC175P0C221 793 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 ETFAP13804 333 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 CD58P19256 250 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 KLRC2P26717 231 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 THPOP40225 353 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 MSH2P43246 934 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 CAPZA2P47755 286 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 TERF1P54274 439 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 RPS13P62277 151 aaKnown RBP3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 UBXN2AP68543 259 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 BFSP1Q12934 665 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 ALCAMQ13740 583 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 LRCH2Q5VUJ6 765 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 C11orf88Q6PI97 169 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 DPPA4Q7L190 304 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 CHST3Q7LGC8 479 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 PLPPR4Q7Z2D5 763 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 GALNTL5Q7Z4T8 443 aa3.42□□□□□ -1.86
RNU6-840P-201ENST00000517275 AMIGO2Q86SJ2 522 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms