RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 EPOPA6NHQ4 379 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 A8MXK9 166 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 FAM227AF5H4B4 570 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 SMAD7O15105 426 aaKnown RBP-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 KCNQ2O43526 872 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 IGKV1-16P04430 117 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 DCNP07585 359 aaKnown RBP-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 CELP19835 753 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 TMPOP42166 694 aaKnown RBP-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 NASPP49321 788 aaPredicted RBP-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 AGFG1P52594 562 aaKnown RBP-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 IL9RQ01113 521 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 MALLQ13021 153 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 SEMA3BQ13214 749 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 CNN3Q15417 329 aaKnown RBP-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 ZNF74Q16587 644 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 ATP13A5Q4VNC0 1218 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 WLSQ5T9L3 541 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 MARC1Q5VT66 337 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 SAXO2Q658L1 398 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 AAGABQ6PD74 315 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 GLDNQ6ZMI3 551 aaPredicted RBP-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 TIPARPQ7Z3E1 657 aaKnown RBP-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 ABHD12BQ7Z5M8 362 aaPredicted RBP-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 CCDC25Q86WR0 208 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 SPARTQ8N0X7 666 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 ZNF610Q8N9Z0 462 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 ZNF397Q8NF99 534 aaPredicted RBP-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 PSPC1Q8WXF1 523 aaKnown RBP-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 AUTS2Q8WXX7 1259 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 IGSF8Q969P0 613 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 RAX2Q96IS3 184 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 DGCR6LQ9BY27 220 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 TMX1Q9H3N1 280 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 TMEM51Q9NW97 253 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 HCN3Q9P1Z3 774 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 B3GAT1Q9P2W7 334 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 FBXL17Q9UF56 701 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 CD2APQ9Y5K6 639 aa-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 SRRM2Q9UQ35 2752 aaKnown RBP-1.13□□□□□ -2.59
SNORA40.16-201ENST00000517238 MEGF6O75095 1541 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 KIAA1217Q5T5P2 1943 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 IGLV2-18A0A075B6J9 118 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 CPED1A4D0V7 1026 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 GSAPA4D1B5 854 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 WDR1O75083 606 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 RAB11FIP3O75154 756 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 IPO7O95373 1038 aaKnown RBP-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 SNAI1O95863 264 aaPredicted RBP-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 TSHBP01222 138 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 NR3C1P04150 777 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 ACHEP22303 614 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 OXTRP30559 389 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 LSP1P33241 339 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 STAT6P42226 847 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 DPP6P42658 865 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 PTPROQ16827 1216 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 HLA-BQ31612 363 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 G2E3Q7L622 706 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 RNF180Q86T96 592 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 RAB42Q8N4Z0 105 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 AADATQ8N5Z0 425 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 ZNF433Q8N7K0 673 aaPredicted RBP-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 TMEM178AQ8NBL3 297 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 C3orf20Q8ND61 904 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 SUN3Q8TAQ9 357 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 CREB3L4Q8TEY5 395 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 SLC20A1Q8WUM9 679 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 CHTF18Q8WVB6 975 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 ACAP3Q96P50 834 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 MMTAG2Q9BU76 263 aaKnown RBP-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 ABHD14AQ9BUJ0 271 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 HOXD1Q9GZZ0 328 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 SAP30LQ9HAJ7 183 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 ZNF331Q9NQX6 463 aaPredicted RBP-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 MTPAPQ9NVV4 582 aaKnown RBP eCLIP-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 SIDT1Q9NXL6 827 aaKnown RBP-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 SLC9A2Q9UBY0 812 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 CRLS1Q9UJA2 301 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 PCDHGB7Q9Y5F8 929 aa-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 COL27A1Q8IZC6 1860 aaPredicted RBP-1.14□□□□□ -2.59
SNORA40.16-201ENST00000517238 MICAL3Q7RTP6 2002 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 NAV3Q8IVL0 2385 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 IGKV1-8A0A0C4DH67 115 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 TNFSF11O14788 317 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 TGM5O43548 720 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 RFPL2O75678 378 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 LYPD3O95274 346 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 C6orf47O95873 294 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 RFPL3SP0C7P2 107 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 SUPT20HL2P0C7V6 817 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 CKMT1AP12532 417 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 ATP2A2P16615 1042 aaKnown RBP-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 CDK11BP21127 795 aaKnown RBP-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 ITGA3P26006 1051 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 DUSP1P28562 367 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 CHRNA5P30532 468 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 SLC8A1P32418 973 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 CAPGP40121 348 aa-1.15□□□□□ -2.59
SNORA40.16-201ENST00000517238 ETV5P41161 510 aa-1.15□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms