RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 NCEH1Q6PIU2 408 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 HAPLN4Q86UW8 402 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 CCDC105Q8IYK2 499 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 ZBTB2Q8N680 514 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 FRMD1Q8N878 549 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 HUS1BQ8NHY5 278 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 SMARCE1Q969G3 411 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 FAM149B1Q96BN6 582 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 TREX2Q9BQ50 279 aaPredicted RBP5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 C1QTNF5Q9BXJ0 243 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 FBRSL1Q9HCM7 1045 aaKnown RBP5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 SEPT11Q9NVA2 429 aaKnown RBP5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 PTGDR2Q9Y5Y4 395 aa5.29□□□□□ -1.56
HMGCS1-207ENST00000514610 A0A1W2PRG0 241 aa5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 FSD2A1L4K1 749 aa5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 TTC36A6NLP5 189 aa5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 INO80B-WBP1J3KQ70 363 aa5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 ZBED4O75132 1171 aa5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 EIF2S1P05198 315 aaKnown RBP5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 RARGP13631 454 aa5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 IL7RP16871 459 aa5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 ARRB2P32121 409 aa5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 CASP2P42575 452 aa5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 DRG2P55039 364 aaKnown RBP5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 ABATP80404 500 aa5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 ITGADQ13349 1161 aa5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 MAMLD1Q13495 774 aa5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 MMEL1Q495T6 779 aa5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 CLEC4GQ6UXB4 293 aa5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 IKBIPQ70UQ0 350 aa5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 MTSS1LQ765P7 747 aa5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 WDTC1Q8N5D0 677 aa5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 PDILTQ8N807 584 aa5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 NEK9Q8TD19 979 aa5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 PPP1R13BQ96KQ4 1090 aa5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 FCRL4Q96PJ5 515 aa5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 RBM38Q9H0Z9 239 aaKnown RBP5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 EBF3Q9H4W6 596 aa5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 ESRP2Q9H6T0 727 aaKnown RBP5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 CNOT8Q9UFF9 292 aaKnown RBP5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 AAR2Q9Y312 384 aaKnown RBP5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 TTC3P53804 2025 aa5.28□□□□□ -1.56
HMGCS1-207ENST00000514610 UTYO14607 1347 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 FAM237AA0A1B0GTK4 181 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 FAM90A8PA6NJQ4 464 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 ITM2AO43736 263 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 CRYABP02511 175 aaKnown RBP5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 CYC1P08574 325 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 FAM90A13PP0C7W8 464 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 FAM90A24PP0C7X0 464 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 NAGAP17050 411 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 CHATP28329 748 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 HADHAP40939 763 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 ARF3P61204 181 aaPredicted RBP5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 ARF1P84077 181 aaKnown RBP5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 ST3GAL1Q11201 340 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 CSTF3Q12996 717 aaKnown RBP5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 OLIG2Q13516 323 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 DCAF6Q58WW2 860 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 DNTTIP2Q5QJE6 756 aaKnown RBP5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 WDR78Q5VTH9 848 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 OTUD1Q5VV17 481 aaPredicted RBP5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 ITPRIPL1Q6GPH6 555 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 LINGO2Q7L985 606 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 PCGF5Q86SE9 256 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 PRR26Q8N8Z3 221 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 BEST2Q8NFU1 509 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 TRIB2Q92519 343 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 ARHGEF2Q92974 986 aaKnown RBP5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 SLC41A2Q96JW4 573 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 SLITRK1Q96PX8 696 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 MKKSQ9NPJ1 570 aaPredicted RBP5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 EHD2Q9NZN4 543 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 OR6C3Q9NZP0 311 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 CEPT1Q9Y6K0 416 aa5.27□□□□□ -1.57
HMGCS1-207ENST00000514610 VWA5AO00534 786 aa5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 NKX2-2O95096 273 aa5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 NDUFB4O95168 129 aa5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 KRT10P13645 584 aa5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 HOXA11P31270 313 aaPredicted RBP5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 LINC00205P59089 165 aa5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 SORDQ00796 357 aa5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 ROR2Q01974 943 aaKnown RBP5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 DRAP1Q14919 205 aaPredicted RBP5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 SHBQ15464 509 aa5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 MEA1Q16626 185 aa5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 FSCBQ5H9T9 825 aa5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 KLHL24Q6TFL4 600 aa5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 CCDC129Q6ZRS4 1044 aa5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 ARHGAP12Q8IWW6 846 aa5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 OIT3Q8WWZ8 545 aa5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 ADAMTS14Q8WXS8 1223 aa5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 ZNF570Q96NI8 536 aa5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 FAM110AQ9BQ89 295 aa5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 DCLK3Q9C098 648 aa5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 KCNN2Q9H2S1 579 aa5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 GHITMQ9H3K2 345 aa5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 EIF2B3Q9NR50 452 aaKnown RBP5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 HCFC1R1Q9NWW0 138 aa5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 DLGAP2Q9P1A6 1054 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms