RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 LCA5LO95447 670 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 IGSF6O95976 241 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 CSF2P04141 144 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 SERPING1P05155 500 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 CYP1A2P05177 515 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 C1SP09871 688 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 FAM228BP0C875 321 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 MYBL1P10243 752 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 RARAP10276 462 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 MYF5P13349 255 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 CKMT2P17540 419 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 AMPD1P23109 780 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 ACP1P24666 158 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 CASQ1P31415 396 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 PCK1P35558 622 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 IGFALSP35858 605 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 GMPRP36959 345 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 HCAR3P49019 387 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 PFN3P60673 137 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 RHOAP61586 193 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 GNG11P61952 73 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 SEMG2Q02383 582 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 SLC25A11Q02978 314 aaKnown RBP5.88□□□□□ -1.47
RNF4-217ENST00000511892 RAD51Q06609 339 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 SGCGQ13326 291 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 ZNF211Q13398 564 aaPredicted RBP5.88□□□□□ -1.47
RNF4-217ENST00000511892 SPA17Q15506 151 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 SMTNL2Q2TAL5 461 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 TMEM52BQ4KMG9 183 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 PPP6R3Q5H9R7 873 aaPredicted RBP5.88□□□□□ -1.47
RNF4-217ENST00000511892 SYT10Q6XYQ8 523 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 KYAT3Q6YP21 454 aaKnown RBP5.88□□□□□ -1.47
RNF4-217ENST00000511892 PTAR1Q7Z6K3 402 aaPredicted RBP5.88□□□□□ -1.47
RNF4-217ENST00000511892 SRLQ86TD4 932 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 ZSWIM9Q86XI8 627 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 PROSER1Q86XN7 944 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 CPNE8Q86YQ8 564 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 DCP2Q8IU60 420 aaKnown RBP5.88□□□□□ -1.47
RNF4-217ENST00000511892 CAMK1DQ8IU85 385 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 GALNT15Q8N3T1 639 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 TP53I13Q8NBR0 393 aaPredicted RBP5.88□□□□□ -1.47
RNF4-217ENST00000511892 TSEN2Q8NCE0 465 aaKnown RBP5.88□□□□□ -1.47
RNF4-217ENST00000511892 OR4C6Q8NH72 309 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 FAM174AQ8TBP5 190 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 MDM1Q8TC05 714 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 ARHGEF26Q96DR7 871 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 TRIM11Q96F44 468 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 IFT43Q96FT9 208 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.88□□□□□ -1.47
RNF4-217ENST00000511892 WRAP53Q9BUR4 548 aaKnown RBP5.88□□□□□ -1.47
RNF4-217ENST00000511892 THAP2Q9H0W7 228 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 SUV39H2Q9H5I1 410 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 MRPL47Q9HD33 250 aaKnown RBP5.88□□□□□ -1.47
RNF4-217ENST00000511892 MBNL1Q9NR56 388 aaKnown RBP5.88□□□□□ -1.47
RNF4-217ENST00000511892 SCINQ9Y6U3 715 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 U3KQA8 63 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 CFAP46Q8IYW2 2715 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 ARHGAP42A6NI28 874 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 DFFAO00273 331 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 TRAFD1O14545 582 aaPredicted RBP5.87□□□□□ -1.47
RNF4-217ENST00000511892 FPGTO14772 594 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 SCAMP1O15126 338 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 FFAR2O15552 330 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 DAPK3O43293 454 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 RFPL3O75679 317 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 PALMO75781 387 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 NEBLO76041 1014 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 TM7SF2O76062 418 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 DXOO77932 396 aaKnown RBP5.87□□□□□ -1.47
RNF4-217ENST00000511892 PEX11BO96011 259 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 PRKCGP05129 697 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 CKMT1AP12532 417 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 NME1P15531 152 aaKnown RBP5.87□□□□□ -1.47
RNF4-217ENST00000511892 DESP17661 470 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 IL4RP24394 825 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 MMP12P39900 470 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 RABIFP47224 123 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 CSNK1DP48730 415 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 VAV2P52735 878 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 IL10RBQ08334 325 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 CYP4F3Q08477 520 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 NSUN2Q08J23 767 aaKnown RBP eCLIP5.87□□□□□ -1.47
RNF4-217ENST00000511892 KIF5AQ12840 1032 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 EIF2B5Q13144 721 aaKnown RBP5.87□□□□□ -1.47
RNF4-217ENST00000511892 ILKQ13418 452 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 PDE1CQ14123 709 aaPredicted RBP5.87□□□□□ -1.47
RNF4-217ENST00000511892 RFTN1Q14699 578 aaPredicted RBP5.87□□□□□ -1.47
RNF4-217ENST00000511892 ACAP1Q15027 740 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 DPYSL2Q16555 572 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 UGP2Q16851 508 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 ASTE1Q2TB18 679 aaPredicted RBP5.87□□□□□ -1.47
RNF4-217ENST00000511892 BOLA3Q53S33 107 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 TDRD12Q587J7 1177 aaKnown RBP5.87□□□□□ -1.47
RNF4-217ENST00000511892 HES3Q5TGS1 186 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 ALKBH5Q6P6C2 394 aaKnown RBP5.87□□□□□ -1.47
RNF4-217ENST00000511892 POLNQ7Z5Q5 900 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 VPS36Q86VN1 386 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 PARGQ86W56 976 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 TMPRSS12Q86WS5 348 aa5.87□□□□□ -1.47
RNF4-217ENST00000511892 PGBD5Q8N414 524 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms