RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 PSTPIP1O43586 416 aa16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 SDC3O75056 442 aa16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 LDOC1O95751 146 aaPredicted RBP16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 CSF2P04141 144 aa16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 KRT1P04264 644 aa16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 PDHA1P08559 390 aa16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 GIMD1P0DJR0 217 aa16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 KRT10P13645 584 aa16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 SPINK2P20155 84 aa16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 ADCY2Q08462 1091 aa16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 PDE1CQ14123 709 aaPredicted RBP16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 PTPRRQ15256 657 aa16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 LLGL1Q15334 1064 aa16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 FAM182AQ5T1J6 154 aa16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 NPNTQ6UXI9 565 aa16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 SPOCD1Q6ZMY3 1216 aa16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 RFX6Q8HWS3 928 aa16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 KATNAL2Q8IYT4 538 aa16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 ACRBPQ8NEB7 543 aa16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 PDCD6IPQ8WUM4 868 aaKnown RBP16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 CALR3Q96L12 384 aaKnown RBP16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 OLFM3Q96PB7 478 aa16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 POLR1EQ9GZS1 481 aaKnown RBP16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 B4GALT6Q9UBX8 382 aa16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 APOBEC2Q9Y235 224 aaKnown RBP16.21■□□□□ 0.19
PDLIM5-216ENST00000511767 GOLGA4Q13439 2230 aaKnown RBP16.21■□□□□ 0.18
PDLIM5-216ENST00000511767 KCNK1O00180 336 aa16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 TRIM38O00635 465 aa16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 HYAL3O43820 417 aaPredicted RBP16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 PIAS2O75928 621 aa16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 RECQL5O94762 991 aaPredicted RBP16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 PRLP01236 227 aa16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 NR2C2P49116 596 aa16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 PEX5P50542 639 aa16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 IFI35P80217 286 aaPredicted RBP16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 DSC2Q02487 901 aa16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 TFDP2Q14188 446 aa16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 INPP5AQ14642 412 aa16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 PDK1Q15118 436 aa16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 IRF4Q15306 451 aa16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 INAVAQ3KP66 663 aa16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 ODF2Q5BJF6 829 aa16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 ARMC12Q5T9G4 340 aa16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 C11orf63Q6NUN7 778 aa16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 KRT35Q92764 455 aa16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 APOOQ9BUR5 198 aa16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 SCNM1Q9BWG6 230 aa16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 BRD8Q9H0E9 1235 aa16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 DNAJC28Q9NX36 388 aa16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 SAE1Q9UBE0 346 aaPredicted RBP16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 PNMA8BQ9ULN7 279 aaPredicted RBP16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 PCDHA3Q9Y5H8 950 aa16.2■□□□□ 0.18
PDLIM5-216ENST00000511767 CST8O60676 142 aa16.19■□□□□ 0.18
PDLIM5-216ENST00000511767 IPO7O95373 1038 aaKnown RBP16.19■□□□□ 0.18
PDLIM5-216ENST00000511767 HLA-DQB2P05538 268 aa16.19■□□□□ 0.18
PDLIM5-216ENST00000511767 MMP2P08253 660 aa16.19■□□□□ 0.18
PDLIM5-216ENST00000511767 NME1P15531 152 aaKnown RBP16.19■□□□□ 0.18
PDLIM5-216ENST00000511767 MARCKSL1P49006 195 aa16.19■□□□□ 0.18
PDLIM5-216ENST00000511767 VAV2P52735 878 aa16.19■□□□□ 0.18
PDLIM5-216ENST00000511767 HNRNPKP61978 463 aaKnown RBP eCLIP16.19■□□□□ 0.18
PDLIM5-216ENST00000511767 ZNF211Q13398 564 aaPredicted RBP16.19■□□□□ 0.18
PDLIM5-216ENST00000511767 PTK2BQ14289 1009 aa16.19■□□□□ 0.18
PDLIM5-216ENST00000511767 B4GALNT4Q76KP1 1039 aa16.19■□□□□ 0.18
PDLIM5-216ENST00000511767 DAAM2Q86T65 1068 aa16.19■□□□□ 0.18
PDLIM5-216ENST00000511767 PAF1Q8N7H5 531 aa16.19■□□□□ 0.18
PDLIM5-216ENST00000511767 PLA2G15Q8NCC3 412 aa16.19■□□□□ 0.18
PDLIM5-216ENST00000511767 EXD1Q8NHP7 514 aa16.19■□□□□ 0.18
PDLIM5-216ENST00000511767 KIAA1524Q8TCG1 905 aa16.19■□□□□ 0.18
PDLIM5-216ENST00000511767 CNDP2Q96KP4 475 aaKnown RBP16.19■□□□□ 0.18
PDLIM5-216ENST00000511767 COQ10AQ96MF6 247 aa16.19■□□□□ 0.18
PDLIM5-216ENST00000511767 ZNF830Q96NB3 372 aaPredicted RBP16.19■□□□□ 0.18
PDLIM5-216ENST00000511767 CNTNAP3BQ96NU0 1288 aa16.19■□□□□ 0.18
PDLIM5-216ENST00000511767 SMIM14Q96QK8 99 aa16.19■□□□□ 0.18
PDLIM5-216ENST00000511767 MCCC1Q96RQ3 725 aaPredicted RBP16.19■□□□□ 0.18
PDLIM5-216ENST00000511767 CNTNAP3Q9BZ76 1288 aa16.19■□□□□ 0.18
PDLIM5-216ENST00000511767 FTSJ1Q9UET6 329 aa16.19■□□□□ 0.18
PDLIM5-216ENST00000511767 LRRK1Q38SD2 2015 aa16.18■□□□□ 0.18
PDLIM5-216ENST00000511767 ANKRD36A6QL64 1941 aa16.18■□□□□ 0.18
PDLIM5-216ENST00000511767 GOLGA8CPA6NN73 597 aa16.18■□□□□ 0.18
PDLIM5-216ENST00000511767 ENC1O14682 589 aa16.18■□□□□ 0.18
PDLIM5-216ENST00000511767 SCAMP1O15126 338 aa16.18■□□□□ 0.18
PDLIM5-216ENST00000511767 SIGLEC6O43699 453 aa16.18■□□□□ 0.18
PDLIM5-216ENST00000511767 HEXIM1O94992 359 aaKnown RBP16.18■□□□□ 0.18
PDLIM5-216ENST00000511767 CPP00450 1065 aa16.18■□□□□ 0.18
PDLIM5-216ENST00000511767 VIPR1P32241 457 aa16.18■□□□□ 0.18
PDLIM5-216ENST00000511767 HNF1BP35680 557 aa16.18■□□□□ 0.18
PDLIM5-216ENST00000511767 TRIM23P36406 574 aa16.18■□□□□ 0.18
PDLIM5-216ENST00000511767 THOP1P52888 689 aa16.18■□□□□ 0.18
PDLIM5-216ENST00000511767 DYNLT1P63172 113 aa16.18■□□□□ 0.18
PDLIM5-216ENST00000511767 AP1B1Q10567 949 aa16.18■□□□□ 0.18
PDLIM5-216ENST00000511767 CNGA3Q16281 694 aa16.18■□□□□ 0.18
PDLIM5-216ENST00000511767 PROX2Q3B8N5 592 aa16.18■□□□□ 0.18
PDLIM5-216ENST00000511767 BZW1Q7L1Q6 419 aaKnown RBP16.18■□□□□ 0.18
PDLIM5-216ENST00000511767 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.18■□□□□ 0.18
PDLIM5-216ENST00000511767 LRRC57Q8N9N7 239 aa16.18■□□□□ 0.18
PDLIM5-216ENST00000511767 CHKBQ9Y259 395 aa16.18■□□□□ 0.18
PDLIM5-216ENST00000511767 CSNK1G3Q9Y6M4 447 aa16.18■□□□□ 0.18
PDLIM5-216ENST00000511767 hCG_1818297A0A087WSY0 165 aa16.17■□□□□ 0.18
PDLIM5-216ENST00000511767 A0A0U1RQJ8 604 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms