RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 PROM1O43490 865 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 TRAPPC3O43617 180 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 FAM189A1O60320 539 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 RASSF9O75901 435 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 PIGRP01833 764 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 ERBB2P04626 1255 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 HNRNPA1P09651 372 aaKnown RBP eCLIP3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 NR2F6P10588 404 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 HARSP12081 509 aaKnown RBP3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 LAMP2P13473 410 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 BMP5P22003 454 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 SCP2P22307 547 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 TKTP29401 623 aaKnown RBP3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 MARCKSP29966 332 aaPredicted RBP3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 HOXA9P31269 272 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 RPL9P32969 192 aaKnown RBP3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 OR1D2P34982 312 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 BRCC3P46736 316 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 PTH2RP49190 550 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 CLCN2P51788 898 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 MAPK10P53779 464 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 NXPH1P58417 271 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 RPS16P62249 146 aaKnown RBP3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 NUCB2P80303 420 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 SIM1P81133 766 aaPredicted RBP3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 GTF2BQ00403 316 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 NHLH1Q02575 133 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 COL10A1Q03692 680 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 E2F2Q14209 437 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 DHX8Q14562 1220 aaKnown RBP3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 ZNF169Q14929 603 aaPredicted RBP3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 STK38Q15208 465 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 ZBTB6Q15916 424 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 ZIK1Q3SY52 487 aaPredicted RBP3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 SLC44A4Q53GD3 710 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 SPECC1Q5M775 1068 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 ICE2Q659A1 982 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 ADALQ6DHV7 355 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 SLC8B1Q6J4K2 584 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 KRTAP5-11Q6L8G4 156 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 SHC4Q6S5L8 630 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 PEG10Q86TG7 708 aaKnown RBP3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 GPBP1Q86WP2 473 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 SUGP1Q8IWZ8 645 aaKnown RBP3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 FAM109AQ8N4B1 249 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 MYCT1Q8N699 235 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 PRSS33Q8NF86 280 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 ZNF461Q8TAF7 563 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 KCNG4Q8TDN1 519 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 STAMQ92783 540 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 TTC17Q96AE7 1141 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 FKBP10Q96AY3 582 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 C18orf25Q96B23 403 aaPredicted RBP3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 MYADMQ96S97 322 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 FIZ1Q96SL8 496 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 MESP1Q9BRJ9 268 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 PTDSS2Q9BVG9 487 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 ZNF518BQ9C0D4 1074 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 PLEKHA5Q9HAU0 1116 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 PARVGQ9HBI0 331 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 IGSF9Q9P2J2 1179 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 EPS15L1Q9UBC2 864 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 MTRRQ9UBK8 725 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 AFF4Q9UHB7 1163 aaKnown RBP3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 ZNHIT2Q9UHR6 403 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 ODF2LQ9ULJ1 636 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 NDRG4Q9ULP0 352 aaKnown RBP3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 TBX20Q9UMR3 447 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 DUSP12Q9UNI6 340 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 CORO2BQ9UQ03 480 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 ATP6V1DQ9Y5K8 247 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 SNX13Q9Y5W8 968 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 CDY1Q9Y6F8 540 aa3.74□□□□□ -1.81
UBE2D3-226ENST00000508635 PLXNA3P51805 1871 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 TTC26A0AVF1 554 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 ARHGEF37A1IGU5 675 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 FRMD3A2A2Y4 597 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 MYMKA6NI61 221 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 LACTBL1A8MY62 500 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 ISM1B1AKI9 464 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 ANKRD63C9JTQ0 380 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 PYCARD-AS1I3L0S3 204 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 K7ENM7 598 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 M0QZQ0 153 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 HNRNPDLO14979 420 aaKnown RBP3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 SYN3O14994 580 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 MPPED1O15442 326 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 CCL16O15467 120 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 FRS3O43559 492 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 TBCAO75347 108 aaKnown RBP3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 OAZ2O95190 189 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 NUDT3O95989 172 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 KRT18P05783 430 aaKnown RBP3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 ADRB2P07550 413 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 CLTAP09496 248 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 ELFN1P0C7U0 828 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 CXCL8P10145 99 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 TYRP1P17643 537 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 CYP3A5P20815 502 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms