RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 MYBPHQ13203 477 aa4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 DMP1Q13316 513 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 GPR68Q15743 365 aa4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 CCNG2Q16589 344 aa4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 AP5B1Q2VPB7 878 aa4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 CFAP58Q5T655 872 aa4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 MFSD4BQ5TF39 518 aa4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 SPATA1Q5VX52 437 aa4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 ATG16L1Q676U5 607 aa4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 GHDCQ8N2G8 530 aa4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 TEX45Q8NA69 505 aa4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 SORCS1Q8WY21 1168 aa4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 TMEM18Q96B42 140 aa4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 RBM17Q96I25 401 aaKnown RBP4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 CHCHD6Q9BRQ6 235 aa4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 GFRA4Q9GZZ7 299 aa4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 TBX20Q9UMR3 447 aa4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 SLC45A1Q9Y2W3 748 aa4.37□□□□□ -1.71
TRAPPC13-209ENST00000508304 A0A0A0MQY5 61 aa4.36□□□□□ -1.71
TRAPPC13-209ENST00000508304 A0A0U1RQJ8 604 aa4.36□□□□□ -1.71
TRAPPC13-209ENST00000508304 ANP32CO43423 234 aa4.36□□□□□ -1.71
TRAPPC13-209ENST00000508304 ZG16O60844 167 aa4.36□□□□□ -1.71
TRAPPC13-209ENST00000508304 CLDN7O95471 211 aa4.36□□□□□ -1.71
TRAPPC13-209ENST00000508304 GJC1P36383 396 aa4.36□□□□□ -1.71
TRAPPC13-209ENST00000508304 NR1H2P55055 460 aa4.36□□□□□ -1.71
TRAPPC13-209ENST00000508304 ARF3P61204 181 aaPredicted RBP4.36□□□□□ -1.71
TRAPPC13-209ENST00000508304 ARF1P84077 181 aaKnown RBP4.36□□□□□ -1.71
TRAPPC13-209ENST00000508304 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.36□□□□□ -1.71
TRAPPC13-209ENST00000508304 DLG1Q12959 904 aa4.36□□□□□ -1.71
TRAPPC13-209ENST00000508304 IL13RA2Q14627 380 aa4.36□□□□□ -1.71
TRAPPC13-209ENST00000508304 CTXN3Q4LDR2 81 aa4.36□□□□□ -1.71
TRAPPC13-209ENST00000508304 DCAF6Q58WW2 860 aa4.36□□□□□ -1.71
TRAPPC13-209ENST00000508304 MAP3K21Q5TCX8 1036 aa4.36□□□□□ -1.71
TRAPPC13-209ENST00000508304 PLEKHA7Q6IQ23 1121 aa4.36□□□□□ -1.71
TRAPPC13-209ENST00000508304 ACAD10Q6JQN1 1059 aa4.36□□□□□ -1.71
TRAPPC13-209ENST00000508304 NEK10Q6ZWH5 1172 aa4.36□□□□□ -1.71
TRAPPC13-209ENST00000508304 RFFLQ8WZ73 363 aa4.36□□□□□ -1.71
TRAPPC13-209ENST00000508304 ATOH1Q92858 354 aaPredicted RBP4.36□□□□□ -1.71
TRAPPC13-209ENST00000508304 NPLQ9BXD5 320 aaPredicted RBP4.36□□□□□ -1.71
TRAPPC13-209ENST00000508304 PAM16Q9Y3D7 125 aa4.36□□□□□ -1.71
TRAPPC13-209ENST00000508304 TTLL3Q9Y4R7 772 aa4.36□□□□□ -1.71
TRAPPC13-209ENST00000508304 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
TRAPPC13-209ENST00000508304 A0A087X0M5 115 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 A0A1B0GX30 115 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 TARSL2A2RTX5 802 aaKnown RBP4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 FAM157AC9JC47 383 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 CCER2I3L3R5 266 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 APOHP02749 345 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 AFPP02771 609 aaKnown RBP4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 CSF1P09603 554 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 DGKAP23743 735 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 CHMP24386 653 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 KRT20P35900 424 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 MYBPC2Q14324 1141 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 RBBP5Q15291 538 aaKnown RBP4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 ZNF484Q5JVG2 852 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 TMCO3Q6UWJ1 677 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 CCDC129Q6ZRS4 1044 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 CHD1LQ86WJ1 897 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 ARMC8Q8IUR7 673 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 RBFAQ8N0V3 343 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 OR8H2Q8N162 312 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 WDSUB1Q8N9V3 476 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 USP38Q8NB14 1042 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 TDRD7Q8NHU6 1098 aaKnown RBP4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 SH3KBP1Q96B97 665 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 OTULINQ96BN8 352 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 TXNDC15Q96J42 360 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 C7orf26Q96N11 449 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 TWNKQ96RR1 684 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 REEP2Q9BRK0 252 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 HAUS2Q9NVX0 235 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 TMEM160Q9NX00 188 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 CNPY2Q9Y2B0 182 aa4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 COL2A1P02458 1487 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC13-209ENST00000508304 PGPEP1LA6NFU8 196 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 NPIPB11E5RHQ5 1161 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 STX16-NPEPL1H3BU86 382 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 CHL1O00533 1208 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 STX16O14662 325 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 TSPAN4O14817 238 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 CLGNO14967 610 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 KLK10O43240 276 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 TBX6O95947 436 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 HSPA1AP0DMV8 641 aaKnown RBP4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 HSPA1BP0DMV9 641 aaKnown RBP4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 MTNR1AP48039 350 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 PEX5P50542 639 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 CCR5P51681 352 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 RPP30P78346 268 aaKnown RBP4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 POU5F1Q01860 360 aaKnown RBP4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 CTTNQ14247 550 aaKnown RBP4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 NFIL3Q16649 462 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 GPATCH4Q5T3I0 446 aaKnown RBP4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 TBC1D9BQ66K14 1250 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 TYW3Q6IPR3 259 aaKnown RBP4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 DENND1BQ6P3S1 775 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 MARK2Q7KZI7 788 aaKnown RBP4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 LRRC8DQ7L1W4 858 aa4.34□□□□□ -1.71
TRAPPC13-209ENST00000508304 CPLX4Q7Z7G2 160 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms