RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 RCOR3Q9P2K3 495 aaPredicted RBP3.69□□□□□ -1.82
USP46-205ENST00000504078 SPASTQ9UBP0 616 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 VPS51Q9UID3 782 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 PPM1HQ9ULR3 514 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 NOVA2Q9UNW9 492 aaKnown RBP3.69□□□□□ -1.82
USP46-205ENST00000504078 GPR34Q9UPC5 381 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 RNF215Q9Y6U7 377 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 RP1P56715 2156 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 UNC79Q9P2D8 2635 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 SPTA1P02549 2419 aa3.69□□□□□ -1.82
USP46-205ENST00000504078 UTP20O75691 2785 aaKnown RBP3.68□□□□□ -1.82
USP46-205ENST00000504078 TEP1Q99973 2627 aaKnown RBP3.68□□□□□ -1.82
USP46-205ENST00000504078 ARHGAP10A1A4S6 786 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 TCAF2A6NFQ2 919 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 FPGTO14772 594 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 YY2O15391 372 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 POLR2DO15514 142 aaKnown RBP3.68□□□□□ -1.82
USP46-205ENST00000504078 IRAK2O43187 625 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 KLRC4O43908 158 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 RAD1O60671 282 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 DNAJB5O75953 348 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 RASGRP1O95267 797 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 PDGFAP04085 211 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 FYNP06241 537 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 SETSIPP0DME0 302 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 KRT13P13646 458 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 NR2F2P24468 414 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 CSF2RBP32927 897 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 RABIFP47224 123 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 CCNHP51946 323 aaPredicted RBP3.68□□□□□ -1.82
USP46-205ENST00000504078 NEK3P51956 506 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 AP3M2P53677 418 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 PFN3P60673 137 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 CHAF1BQ13112 559 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 NME3Q13232 169 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 SERINC3Q13530 473 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 MORC3Q14149 939 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 TAF5Q15542 800 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 ALG11Q2TAA5 492 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 CBWD6Q4V339 395 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 ALFQ53S48 1182 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 CBWD3Q5JTY5 395 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 CBWD5Q5RIA9 395 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 SNAP47Q5SQN1 464 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 MPP7Q5T2T1 576 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 ATXN7L2Q5T6C5 722 aaPredicted RBP3.68□□□□□ -1.82
USP46-205ENST00000504078 FHL5Q5TD97 284 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 TCERG1LQ5VWI1 586 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 NKAIN2Q5VXU1 208 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 CAPRIN2Q6IMN6 1127 aaKnown RBP3.68□□□□□ -1.82
USP46-205ENST00000504078 ESRP1Q6NXG1 681 aaKnown RBP3.68□□□□□ -1.82
USP46-205ENST00000504078 FBXL22Q6P050 247 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 DENND1BQ6P3S1 775 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 SHC4Q6S5L8 630 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 DPY19L3Q6ZPD9 716 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 ZNF765Q7L2R6 523 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 SPRED1Q7Z699 444 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 ATCAYQ86WG3 371 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 WFDC3Q8IUB2 231 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 PASD1Q8IV76 773 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 UNC45BQ8IWX7 931 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 C12orf56Q8IXR9 622 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 SMYD4Q8IYR2 804 aaPredicted RBP3.68□□□□□ -1.82
USP46-205ENST00000504078 NRSN1Q8IZ57 195 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 CACNA2D3Q8IZS8 1091 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 TMEM102Q8N9M5 508 aaPredicted RBP3.68□□□□□ -1.82
USP46-205ENST00000504078 CCDC150Q8NCX0 1101 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 OR2A12Q8NGT7 310 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 CCL4L1Q8NHW4 92 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 PATE1Q8WXA2 126 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 TAF4BQ92750 862 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 ERCC4Q92889 916 aaPredicted RBP3.68□□□□□ -1.82
USP46-205ENST00000504078 ART4Q93070 314 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 NKD1Q969G9 470 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 ALG14Q96F25 216 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 SLC39A13Q96H72 371 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 TMEM74Q96NL1 305 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 KLF6Q99612 283 aaPredicted RBP3.68□□□□□ -1.82
USP46-205ENST00000504078 PRMT1Q99873 361 aaKnown RBP3.68□□□□□ -1.82
USP46-205ENST00000504078 DDX50Q9BQ39 737 aaKnown RBP3.68□□□□□ -1.82
USP46-205ENST00000504078 SLC17A9Q9BYT1 436 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 SLC13A1Q9BZW2 595 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 SIK2Q9H0K1 926 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 KCTD10Q9H3F6 313 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 ZFYVE1Q9HBF4 777 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 USP29Q9HBJ7 922 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 TMEM8AQ9HCN3 771 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 MRPL40Q9NQ50 206 aaKnown RBP3.68□□□□□ -1.82
USP46-205ENST00000504078 CNGB3Q9NQW8 809 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 MBNL1Q9NR56 388 aaKnown RBP3.68□□□□□ -1.82
USP46-205ENST00000504078 DMAC2Q9NW81 257 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 DDIT4Q9NX09 232 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 MPP6Q9NZW5 540 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 TMEM63CQ9P1W3 806 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 IL36AQ9UHA7 158 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 MOSPD1Q9UJG1 213 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 SALL4Q9UJQ4 1053 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 ANAPC2Q9UJX6 822 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 TLR6Q9Y2C9 796 aa3.68□□□□□ -1.82
USP46-205ENST00000504078 FRMD4BQ9Y2L6 1034 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms