RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 RAB6CQ53S08 254 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 FKBP15Q5T1M5 1219 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 ATXN7L2Q5T6C5 722 aaPredicted RBP6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 ENPP7Q6UWV6 458 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 LIPIQ6XZB0 460 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 DPPA4Q7L190 304 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 SPRED1Q7Z699 444 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 SLITRK4Q8IW52 837 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 KYQ8NBH2 561 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 OR56A4Q8NGH8 313 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 OR6K2Q8NGY2 324 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 PCDH19Q8TAB3 1148 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 GPBAR1Q8TDU6 330 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 SLC20A1Q8WUM9 679 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 CCDC74AQ96AQ1 378 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 SGF29Q96ES7 293 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 SCARF2Q96GP6 870 aaPredicted RBP6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 ERGIC2Q96RQ1 377 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 PCDHB18PQ96TA0 734 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 C11orf70Q9BRQ4 267 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 SEMA4CQ9C0C4 833 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 KLC2Q9H0B6 622 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 RAB6CQ9H0N0 254 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 CDH19Q9H159 772 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 ADNPQ9H2P0 1102 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 CLMPQ9H6B4 373 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 ATP13A3Q9H7F0 1226 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 PCDH12Q9NPG4 1184 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 SAMSN1Q9NSI8 373 aaKnown RBP6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 STARD5Q9NSY2 213 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 KLQ9UEF7 1012 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 TUBD1Q9UJT1 453 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 GPR34Q9UPC5 381 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 PPIL1Q9Y3C6 166 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 ACTL7AQ9Y615 435 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 BSNQ9UPA5 3926 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 TERTO14746 1132 aaKnown RBP6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 CAPN5O15484 640 aaPredicted RBP6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 CCP110O43303 1012 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 HTRA2O43464 458 aaPredicted RBP6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 BUB1BO60566 1050 aaPredicted RBP6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 PALMO75781 387 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 RECQL5O94762 991 aaPredicted RBP6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 WISP1O95388 367 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 CPNE6O95741 557 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 RPLP0P05388 317 aaKnown RBP6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 PYGLP06737 847 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 MYCLP1P12525 358 aaPredicted RBP6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 GZMAP12544 262 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 FERP16591 822 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 ITGB6P18564 788 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 CR2P20023 1033 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 TPI1P60174 286 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 POLR2FP61218 127 aaKnown RBP6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 CCL7P80098 99 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 B4GALNT1Q00973 533 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 KCNC4Q03721 635 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 DPTQ07507 201 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 LY6DQ14210 128 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 KRT31Q15323 416 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 SYCP1Q15431 976 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 LINC00303Q3SY05 128 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 CRTC2Q53ET0 693 aaPredicted RBP6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 ERMARDQ5T6L9 678 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 TMEM164Q5U3C3 297 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 PLEKHA7Q6IQ23 1121 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 ACAD10Q6JQN1 1059 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 PNCKQ6P2M8 343 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 DNAJC24Q6P3W2 148 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 B3GNT8Q7Z7M8 397 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 SRLQ86TD4 932 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 CCNJLQ8IV13 435 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 HID1Q8IV36 788 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 MCOLN2Q8IZK6 566 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 ZSCAN1Q8NBB4 408 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 ANKRD20A12PQ8NF67 263 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 SLC30A5Q8TAD4 765 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 KIAA1524Q8TCG1 905 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 TSACCQ96A04 125 aaPredicted RBP6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 FUBP1Q96AE4 644 aaKnown RBP6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 NAF1Q96HR8 494 aaKnown RBP6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 AGPAT1Q99943 283 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 SYT11Q9BT88 431 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 WRAP53Q9BUR4 548 aaKnown RBP6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 TEX101Q9BY14 249 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 MAGEB5Q9BZ81 275 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 NUP62CLQ9H1M0 184 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 CAAP1Q9H8G2 361 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 PARVAQ9NVD7 372 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 CHMP5Q9NZZ3 219 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 PDP2Q9P2J9 529 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 LIMA1Q9UHB6 759 aaKnown RBP6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 RABGEF1Q9UJ41 708 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 PCDHB11Q9Y5F2 797 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 MYO18BQ8IUG5 2567 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 AHCTF1Q8WYP5 2266 aa6.13□□□□□ -1.43
LSM3P4-201ENST00000502948 SETXQ7Z333 2677 aaKnown RBP6.12□□□□□ -1.43
LSM3P4-201ENST00000502948 PRSS38A1L453 326 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms