RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 ELFN1P0C7U0 828 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 CA4P22748 312 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 CTNNA2P26232 953 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 THOP1P52888 689 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 EPHB1P54762 984 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 PFN3P60673 137 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 YPEL5P62699 121 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 IFI35P80217 286 aaPredicted RBP12.86□□□□□ -0.35
HSPG2-213ENST00000498495 ADCY2Q08462 1091 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 RALGDSQ12967 914 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 PDE1CQ14123 709 aaPredicted RBP12.86□□□□□ -0.35
HSPG2-213ENST00000498495 ARHGEF7Q14155 803 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 ACOX1Q15067 660 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 PPP2R5EQ16537 467 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 CCDC181Q5TID7 509 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 ALG1LQ6GMV1 187 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 B4GALNT4Q76KP1 1039 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 NT5DC3Q86UY8 548 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 ZC3H18Q86VM9 953 aaKnown RBP12.86□□□□□ -0.35
HSPG2-213ENST00000498495 SLC22A18ASQ8N1D0 253 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 RNF10Q8N5U6 811 aaKnown RBP12.86□□□□□ -0.35
HSPG2-213ENST00000498495 LRRC57Q8N9N7 239 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 TP53I13Q8NBR0 393 aaPredicted RBP12.86□□□□□ -0.35
HSPG2-213ENST00000498495 ARRDC2Q8TBH0 407 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 TFB1MQ8WVM0 346 aaKnown RBP12.86□□□□□ -0.35
HSPG2-213ENST00000498495 PIH1D2Q8WWB5 315 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 SCRN2Q96FV2 425 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 CDC6Q99741 560 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 MBNL1Q9NR56 388 aaKnown RBP12.86□□□□□ -0.35
HSPG2-213ENST00000498495 B4GALT6Q9UBX8 382 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 TRIM10Q9UDY6 481 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 ADGRG1Q9Y653 693 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 DMXL1Q9Y485 3027 aa12.86□□□□□ -0.35
HSPG2-213ENST00000498495 TMEM131Q92545 1883 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 SPTY2D1-AS1A0A0U1RR47 76 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 GOLGA6L3A6NEY3 463 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 GOLGA8CPA6NN73 597 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 TOR1BO14657 336 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 KRT86O43790 486 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 NRDCO43847 1150 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 FZD6O60353 706 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 CBFA2T3O75081 653 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 RECQL5O94762 991 aaPredicted RBP12.85□□□□□ -0.35
HSPG2-213ENST00000498495 PDHA1P08559 390 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 PECAM1P16284 738 aaPredicted RBP12.85□□□□□ -0.35
HSPG2-213ENST00000498495 CTPS1P17812 591 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 EPHA8P29322 1005 aaPredicted RBP12.85□□□□□ -0.35
HSPG2-213ENST00000498495 VIPR1P32241 457 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 IGFALSP35858 605 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 PEX5P50542 639 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 NIPAL4Q0D2K0 466 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 ZBTB17Q13105 803 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 AGERQ15109 404 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 WSCD2Q2TBF2 565 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 TEX44Q53QW1 395 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 ZNF542PQ5EBM4 170 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 DENND2CQ68D51 928 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 USP45Q70EL2 814 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 LRRC8AQ8IWT6 810 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 EID2Q8N6I1 236 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 UBL4BQ8N7F7 174 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 CNTD1Q8N815 330 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 HAUS1Q96CS2 278 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 IFT43Q96FT9 208 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 AGAP3Q96P47 875 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 CEP41Q9BYV8 373 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 TSGA10Q9BZW7 698 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 GRPEL1Q9HAV7 217 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 DNAJC28Q9NX36 388 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 CHKBQ9Y259 395 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 BTBD3Q9Y2F9 522 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 EFR3BQ9Y2G0 817 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 PPIL1Q9Y3C6 166 aa12.85□□□□□ -0.35
HSPG2-213ENST00000498495 ANKRD36A6QL64 1941 aa12.84□□□□□ -0.35
HSPG2-213ENST00000498495 MIF4GDA9UHW6 222 aaKnown RBP12.84□□□□□ -0.35
HSPG2-213ENST00000498495 MTSS1O43312 755 aa12.84□□□□□ -0.35
HSPG2-213ENST00000498495 SDC3O75056 442 aa12.84□□□□□ -0.35
HSPG2-213ENST00000498495 HNF1BP35680 557 aa12.84□□□□□ -0.35
HSPG2-213ENST00000498495 CD86P42081 329 aa12.84□□□□□ -0.35
HSPG2-213ENST00000498495 HNRNPKP61978 463 aaKnown RBP eCLIP12.84□□□□□ -0.35
HSPG2-213ENST00000498495 FZD2Q14332 565 aa12.84□□□□□ -0.35
HSPG2-213ENST00000498495 IHHQ14623 411 aa12.84□□□□□ -0.35
HSPG2-213ENST00000498495 INPP5AQ14642 412 aa12.84□□□□□ -0.35
HSPG2-213ENST00000498495 IRF4Q15306 451 aa12.84□□□□□ -0.35
HSPG2-213ENST00000498495 BBS12Q6ZW61 710 aa12.84□□□□□ -0.35
HSPG2-213ENST00000498495 PARGQ86W56 976 aa12.84□□□□□ -0.35
HSPG2-213ENST00000498495 APOOQ9BUR5 198 aa12.84□□□□□ -0.35
HSPG2-213ENST00000498495 TDRD1Q9BXT4 1180 aaKnown RBP12.84□□□□□ -0.35
HSPG2-213ENST00000498495 OSBPL8Q9BZF1 889 aa12.84□□□□□ -0.35
HSPG2-213ENST00000498495 PCDH9Q9HC56 1237 aa12.84□□□□□ -0.35
HSPG2-213ENST00000498495 GPR27Q9NS67 375 aa12.84□□□□□ -0.35
HSPG2-213ENST00000498495 KCTD5Q9NXV2 234 aa12.84□□□□□ -0.35
HSPG2-213ENST00000498495 GUCA1BQ9UMX6 200 aa12.84□□□□□ -0.35
HSPG2-213ENST00000498495 DCHS1Q96JQ0 3298 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 A0A0J9YYE9 177 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 NEMP2A6NFY4 417 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 HACD1B0YJ81 288 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 H3BM21 787 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 H7C0C1 242 aa12.83□□□□□ -0.36
HSPG2-213ENST00000498495 APOC4-APOC2K7ER74 178 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms