RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 ARHGAP25P42331 645 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 PEX5P50542 639 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 PPARDQ03181 441 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 ITKQ08881 620 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 TRAF2Q12933 501 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 TARDBPQ13148 414 aaKnown RBP eCLIP11.89□□□□□ -0.51
THBS3-208ENST00000496332 C1orf61Q13536 156 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 DEFB133Q30KQ1 61 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 PRRT3Q5FWE3 981 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 RALGPS1Q5JS13 557 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 HES3Q5TGS1 186 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 SARM1Q6SZW1 724 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 LIPIQ6XZB0 460 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 PROSER1Q86XN7 944 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 RHOT2Q8IXI1 618 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 PHACTR4Q8IZ21 702 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 PQLC3Q8N755 202 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 PDCD7Q8N8D1 485 aaKnown RBP11.89□□□□□ -0.51
THBS3-208ENST00000496332 FAM181AQ8N9Y4 354 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 PLA2G15Q8NCC3 412 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 MDM1Q8TC05 714 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 SPOCK2Q92563 424 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 RAPGEF5Q92565 580 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 FAF2Q96CS3 445 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 APOOQ9BUR5 198 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 SLC13A1Q9BZW2 595 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 B4GALT6Q9UBX8 382 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 APOBEC3BQ9UH17 382 aaKnown RBP11.89□□□□□ -0.51
THBS3-208ENST00000496332 OR1A2Q9Y585 309 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 LAMA5O15230 3695 aa11.89□□□□□ -0.51
THBS3-208ENST00000496332 PTPRBP23467 1997 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 PLXNB3Q9ULL4 1909 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 LY6G6EA0A0G2JKS1 128 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 MATN3O15232 486 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 GCATO75600 419 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 MTA2O94776 668 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 GM2AP17900 193 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 CCNCP24863 283 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 HTR1BP28222 390 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 DUSP3P51452 185 aaPredicted RBP11.88□□□□□ -0.51
THBS3-208ENST00000496332 E2F1Q01094 437 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 INSM1Q01101 510 aaPredicted RBP11.88□□□□□ -0.51
THBS3-208ENST00000496332 GBE1Q04446 702 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 MTM1Q13496 603 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 NFATC4Q14934 902 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 ACOX1Q15067 660 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 IFI16Q16666 785 aaKnown RBP11.88□□□□□ -0.51
THBS3-208ENST00000496332 TIGD7Q6NT04 549 aaPredicted RBP11.88□□□□□ -0.51
THBS3-208ENST00000496332 ZCCHC8Q6NZY4 707 aaKnown RBP11.88□□□□□ -0.51
THBS3-208ENST00000496332 ENPP7Q6UWV6 458 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 HID1Q8IV36 788 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 LRRN4Q8WUT4 740 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 RFFLQ8WZ73 363 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 MAML1Q92585 1016 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 TSACCQ96A04 125 aaPredicted RBP11.88□□□□□ -0.51
THBS3-208ENST00000496332 TBATAQ96M53 351 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 TSGA13Q96PP4 275 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 IL12RB2Q99665 862 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 SEMA3CQ99985 751 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 LRRC61Q9BV99 259 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 USP29Q9HBJ7 922 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 SALL4Q9UJQ4 1053 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 PHTF1Q9UMS5 762 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 U3KQA8 63 aa11.88□□□□□ -0.51
THBS3-208ENST00000496332 CFAP47Q6ZTR5 3102 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 LRRD1A4D1F6 860 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 TPP1O14773 563 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 YY2O15391 372 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 PGLSO95336 258 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 TSHRP16473 764 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 MX2P20592 715 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 NFKBIAP25963 317 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 VIPR1P32241 457 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 BLKP51451 505 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 HK3P52790 923 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 CYP4F3Q08477 520 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 SLC10A2Q12908 348 aaPredicted RBP11.87□□□□□ -0.51
THBS3-208ENST00000496332 CNGA3Q16281 694 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 ALG11Q2TAA5 492 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 ARMC12Q5T9G4 340 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 DENND2CQ68D51 928 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 NYAP1Q6ZVC0 841 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 RD3Q7Z3Z2 195 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.87□□□□□ -0.51
THBS3-208ENST00000496332 TC2NQ8N9U0 490 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 CCNYQ8ND76 341 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 ATL2Q8NHH9 583 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 FATE1Q969F0 183 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 FUBP1Q96AE4 644 aaKnown RBP11.87□□□□□ -0.51
THBS3-208ENST00000496332 SCRN2Q96FV2 425 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 COQ10AQ96MF6 247 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 WDR92Q96MX6 357 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 RNF157Q96PX1 679 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 POLR1EQ9GZS1 481 aaKnown RBP11.87□□□□□ -0.51
THBS3-208ENST00000496332 CLPBQ9H078 707 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 EVA1BQ9NVM1 165 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 RBM22Q9NW64 420 aaKnown RBP eCLIP11.87□□□□□ -0.51
THBS3-208ENST00000496332 DTLQ9NZJ0 730 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 NCKIPSDQ9NZQ3 722 aa11.87□□□□□ -0.51
THBS3-208ENST00000496332 INTUQ9ULD6 942 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms