RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 PHTF1Q9UMS5 762 aa11.56□□□□□ -0.56
CMSS1-205ENST00000489081 PPIL1Q9Y3C6 166 aa11.56□□□□□ -0.56
CMSS1-205ENST00000489081 SPTBN5Q9NRC6 3674 aaKnown RBP11.55□□□□□ -0.56
CMSS1-205ENST00000489081 A0A0J9YYE9 177 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 CCDC78A2IDD5 438 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 FAM159BA6NKW6 160 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 PAPSS2O95340 614 aaPredicted RBP11.55□□□□□ -0.56
CMSS1-205ENST00000489081 TRBC1P01850 177 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 PRNPP04156 253 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 EPHX1P07099 455 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 CTPS1P17812 591 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 PSMA3P25788 255 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 WASP42768 502 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 SEC13P55735 322 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 LAMB3Q13751 1172 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 ELAVL3Q14576 367 aaKnown RBP11.55□□□□□ -0.56
CMSS1-205ENST00000489081 EFTUD2Q15029 972 aaKnown RBP eCLIP11.55□□□□□ -0.56
CMSS1-205ENST00000489081 PTPRRQ15256 657 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 TAF1AQ15573 450 aaPredicted RBP11.55□□□□□ -0.56
CMSS1-205ENST00000489081 KLHL38Q2WGJ6 581 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 ZNF805Q5CZA5 627 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 CEP85LQ5SZL2 805 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 ZNF449Q6P9G9 518 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 BRAT1Q6PJG6 821 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 TPRG1Q6ZUI0 275 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 UNC5BQ8IZJ1 945 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 TTC30BQ8N4P2 665 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 PAF1Q8N7H5 531 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 TMIEQ8NEW7 156 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 MDGA1Q8NFP4 955 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 HCAR2Q8TDS4 363 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 FAM3CQ92520 227 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 PEX13Q92968 403 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 ZBTB9Q96C00 473 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 CYTH2Q99418 400 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 CCDC77Q9BR77 488 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 ROPN1BQ9BZX4 212 aaPredicted RBP11.55□□□□□ -0.56
CMSS1-205ENST00000489081 TRABDQ9H4I3 376 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 ROPN1Q9HAT0 212 aaPredicted RBP11.55□□□□□ -0.56
CMSS1-205ENST00000489081 PRSS16Q9NQE7 514 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 SMYD2Q9NRG4 433 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 HACD3Q9P035 362 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 DKK3Q9UBP4 350 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 SARDHQ9UL12 918 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 RIMKLBQ9ULI2 386 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 PPM1HQ9ULR3 514 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 KCTD3Q9Y597 815 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 ARL5AQ9Y689 179 aa11.55□□□□□ -0.56
CMSS1-205ENST00000489081 EXOC1LA0A1B0GW35 172 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 CAPN8A6NHC0 703 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 AURKAO14965 403 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 PIAS1O75925 651 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 CRTAMO95727 393 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 IVLP07476 585 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 ALPIP09923 528 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 TIMP2P16035 220 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 ARNTP27540 789 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 GCAP28676 217 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 NTSR1P30989 418 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 HNF1BP35680 557 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 ABL2P42684 1182 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 ZNF140P52738 457 aaPredicted RBP11.54□□□□□ -0.56
CMSS1-205ENST00000489081 MRPS21P82921 87 aaKnown RBP11.54□□□□□ -0.56
CMSS1-205ENST00000489081 ACVR1Q04771 509 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 MGAT5Q09328 741 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 CAMK2GQ13555 558 aaPredicted RBP11.54□□□□□ -0.56
CMSS1-205ENST00000489081 MLF2Q15773 248 aaPredicted RBP11.54□□□□□ -0.56
CMSS1-205ENST00000489081 CNGA3Q16281 694 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 CDKN3Q16667 212 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 LONRF1Q17RB8 773 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 KBTBD12Q3ZCT8 623 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 KIAA0930Q6ICG6 404 aaPredicted RBP11.54□□□□□ -0.56
CMSS1-205ENST00000489081 NLRP9Q7RTR0 991 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 GLT6D1Q7Z4J2 308 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 CROCCP2Q86T23 111 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 IL17RCQ8NAC3 791 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 PIP4K2CQ8TBX8 421 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 EPS8L3Q8TE67 593 aaKnown RBP11.54□□□□□ -0.56
CMSS1-205ENST00000489081 STYXQ8WUJ0 223 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 SCRN2Q96FV2 425 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 CERS2Q96G23 380 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 MCCC1Q96RQ3 725 aaPredicted RBP11.54□□□□□ -0.56
CMSS1-205ENST00000489081 LYSMD1Q96S90 227 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 SRPK1Q96SB4 655 aaKnown RBP11.54□□□□□ -0.56
CMSS1-205ENST00000489081 SH3GL2Q99962 352 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 PPCSQ9HAB8 311 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 VPS18Q9P253 973 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 FETUBQ9UGM5 382 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 SORCS3Q9UPU3 1222 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 ZNF711Q9Y462 761 aa11.54□□□□□ -0.56
CMSS1-205ENST00000489081 MIA3Q5JRA6 1907 aa11.53□□□□□ -0.56
CMSS1-205ENST00000489081 SMIM23A6NLE4 172 aa11.53□□□□□ -0.56
CMSS1-205ENST00000489081 C2orf81A6NN90 581 aa11.53□□□□□ -0.56
CMSS1-205ENST00000489081 C16orf96A6NNT2 1141 aa11.53□□□□□ -0.56
CMSS1-205ENST00000489081 CXorf49A8MYA2 514 aaPredicted RBP11.53□□□□□ -0.56
CMSS1-205ENST00000489081 UPK3BL1B0FP48 263 aa11.53□□□□□ -0.56
CMSS1-205ENST00000489081 UPK3BL2E5RIL1 263 aa11.53□□□□□ -0.56
CMSS1-205ENST00000489081 POC1B-GALNT4F8VUJ3 575 aa11.53□□□□□ -0.56
CMSS1-205ENST00000489081 KPNA3O00505 521 aaPredicted RBP11.53□□□□□ -0.56
CMSS1-205ENST00000489081 MAN2B1O00754 1011 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms