RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, humanhuman

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-206ENST00000487602 CD72P21854 359 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 PSMA3P25788 255 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 NMBRP28336 390 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 ABL2P42684 1182 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 EIF3BP55884 814 aaKnown RBP8.04□□□□□ -1.12
RBM28-206ENST00000487602 POLR2LP62875 67 aaKnown RBP8.04□□□□□ -1.12
RBM28-206ENST00000487602 CCINQ13939 588 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 SEPT6Q14141 434 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 FRG1Q14331 258 aaKnown RBP8.04□□□□□ -1.12
RBM28-206ENST00000487602 ELAVL3Q14576 367 aaKnown RBP8.04□□□□□ -1.12
RBM28-206ENST00000487602 STAT4Q14765 748 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 CRYMQ14894 314 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 TAF1AQ15573 450 aaPredicted RBP8.04□□□□□ -1.12
RBM28-206ENST00000487602 HSF5Q4G112 596 aaPredicted RBP8.04□□□□□ -1.12
RBM28-206ENST00000487602 C2orf27AQ580R0 203 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 ZNF805Q5CZA5 627 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 ESRP1Q6NXG1 681 aaKnown RBP8.04□□□□□ -1.12
RBM28-206ENST00000487602 BRAT1Q6PJG6 821 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 CES3Q6UWW8 571 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 ZNF852Q6ZMS4 543 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 DSG4Q86SJ6 1040 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 TTC30BQ8N4P2 665 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 PAF1Q8N7H5 531 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 IL17RCQ8NAC3 791 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 TXNDC5Q8NBS9 432 aaKnown RBP8.04□□□□□ -1.12
RBM28-206ENST00000487602 MDGA1Q8NFP4 955 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 PIP4K2CQ8TBX8 421 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 BLOC1S5Q8TDH9 187 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 ZNF669Q96BR6 464 aaPredicted RBP8.04□□□□□ -1.12
RBM28-206ENST00000487602 MFSD3Q96ES6 412 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 SCRN2Q96FV2 425 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 ZNF778Q96MU6 729 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 SMIM14Q96QK8 99 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 LYSMD1Q96S90 227 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 GABRG3Q99928 467 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 CCDC77Q9BR77 488 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 TRIM56Q9BRZ2 755 aaKnown RBP8.04□□□□□ -1.12
RBM28-206ENST00000487602 TMEM109Q9BVC6 243 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 ROPN1BQ9BZX4 212 aaPredicted RBP8.04□□□□□ -1.12
RBM28-206ENST00000487602 TRABDQ9H4I3 376 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 ACSS3Q9H6R3 686 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 ROPN1Q9HAT0 212 aaPredicted RBP8.04□□□□□ -1.12
RBM28-206ENST00000487602 MAGEE1Q9HCI5 957 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 ARHGEF3Q9NR81 526 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 TREX1Q9NSU2 369 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.04□□□□□ -1.12
RBM28-206ENST00000487602 HACD3Q9P035 362 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 RABGEF1Q9UJ41 708 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 SARDHQ9UL12 918 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 CA14Q9ULX7 337 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 KCTD3Q9Y597 815 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 ARL5AQ9Y689 179 aa8.04□□□□□ -1.12
RBM28-206ENST00000487602 TCRBV9S1A1TA0A576 114 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 CCDC78A2IDD5 438 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 FAM159BA6NKW6 160 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 C2orf81A6NN90 581 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 UPK3BL1B0FP48 263 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 UPK3BL2E5RIL1 263 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 C1QTNF3-AMACRE9PGA6 284 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 KPNA3O00505 521 aaPredicted RBP8.03□□□□□ -1.12
RBM28-206ENST00000487602 AURKAO14965 403 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 SYNCRIPO60506 623 aaKnown RBP8.03□□□□□ -1.12
RBM28-206ENST00000487602 ADAM23O75077 832 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 RNF40O75150 1001 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 TCEA3O75764 348 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 C1QAP02745 245 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 SHBGP04278 402 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 ALPIP09923 528 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 CYP2A6P11509 494 aaPredicted RBP8.03□□□□□ -1.12
RBM28-206ENST00000487602 LPOP22079 712 aaPredicted RBP8.03□□□□□ -1.12
RBM28-206ENST00000487602 NFKBIAP25963 317 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 ITGB7P26010 798 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 STX2P32856 288 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 HNF1BP35680 557 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 ARCN1P48444 511 aaKnown RBP8.03□□□□□ -1.12
RBM28-206ENST00000487602 STARD6P59095 220 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 PDE1BQ01064 536 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 IFFO1Q0D2I5 559 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 STARD3Q14849 445 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 PTPRRQ15256 657 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 CNGA3Q16281 694 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 CDKN3Q16667 212 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 UGP2Q16851 508 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 SKIDA1Q1XH10 827 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 EOGTQ5NDL2 527 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 FAM46CQ5VWP2 391 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 KIAA0930Q6ICG6 404 aaPredicted RBP8.03□□□□□ -1.12
RBM28-206ENST00000487602 ZNF449Q6P9G9 518 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 TRMT10BQ6PF06 316 aaKnown RBP8.03□□□□□ -1.12
RBM28-206ENST00000487602 GLT6D1Q7Z4J2 308 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 TTC7BQ86TV6 843 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 MMAAQ8IVH4 418 aaKnown RBP8.03□□□□□ -1.12
RBM28-206ENST00000487602 UBALD2Q8IYN6 164 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 ZNF687Q8N1G0 1237 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 SYNPOQ8N3V7 929 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.03□□□□□ -1.12
RBM28-206ENST00000487602 OR2T3Q8NH03 318 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 OR2W6PQ8NHA6 318 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 STYXQ8WUJ0 223 aa8.03□□□□□ -1.12
RBM28-206ENST00000487602 PEX13Q92968 403 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms