RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 FBRSL1Q9HCM7 1045 aaKnown RBP10.7□□□□□ -0.7
CCDC171-208ENST00000486641 C8orf4Q9NR00 106 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 CMTM6Q9NX76 183 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.7□□□□□ -0.7
CCDC171-208ENST00000486641 BFARQ9NZS9 450 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 ACTR3BQ9P1U1 418 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 ZFC3H1O60293 1989 aaKnown RBP10.7□□□□□ -0.7
CCDC171-208ENST00000486641 BPTFQ12830 3046 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 ATP6AP2A0A1C7CYW4 349 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 ARPC2O15144 300 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 B4GALT4O60513 344 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 ATP6AP2O75787 350 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 GABBR2O75899 941 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 MT-ND1P03886 318 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 S100BP04271 92 aaPredicted RBP10.69□□□□□ -0.7
CCDC171-208ENST00000486641 SUPT20HL2P0C7V6 817 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 TPH1P17752 444 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 CRHBPP24387 322 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 CAPRIN1Q14444 709 aaKnown RBP10.69□□□□□ -0.7
CCDC171-208ENST00000486641 CTF1Q16619 201 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 Q3C1V9 767 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 SUPT20HL1Q3ZLR7 823 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 PAGE2BQ5JRK9 111 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 UGT3A1Q6NUS8 523 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 LCLAT1Q6UWP7 414 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 KRT27Q7Z3Y8 459 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 SPNS2Q8IVW8 549 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 CEP97Q8IW35 865 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 TP53INP2Q8IXH6 220 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 TMEM192Q8IY95 271 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 MFSD4AQ8N468 514 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 C1orf127Q8N9H9 656 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 S100ZQ8WXG8 99 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 DGCR6LQ9BY27 220 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 CEP44Q9C0F1 390 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 TP63Q9H3D4 680 aaPredicted RBP10.69□□□□□ -0.7
CCDC171-208ENST00000486641 SLC38A10Q9HBR0 1119 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 GDAP2Q9NXN4 497 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 ABCD2Q9UBJ2 740 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 ACOT9Q9Y305 439 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 USP3Q9Y6I4 520 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 H0YAE9 185 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 INPP4BO15327 924 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 KRT75O95678 551 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 PGK1P00558 417 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 AHSGP02765 367 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 ALBP02768 609 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 ITGB3P05106 788 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 BMP4P12644 408 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 HSD17B1P14061 328 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 NMBRP28336 390 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 SOX11P35716 441 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 HADHAP40939 763 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 GLUD2P49448 558 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 NDST1P52848 882 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 FRG1Q14331 258 aaKnown RBP10.69□□□□□ -0.7
CCDC171-208ENST00000486641 MAPK11Q15759 364 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 USP43Q70EL4 1123 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 PSTKQ8IV42 348 aaKnown RBP10.69□□□□□ -0.7
CCDC171-208ENST00000486641 CDAN1Q8IWY9 1227 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 SLC22A17Q8WUG5 538 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 TRIB2Q92519 343 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 HDAC11Q96DB2 347 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 CLIP3Q96DZ5 547 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 ZNF486Q96H40 463 aaPredicted RBP10.69□□□□□ -0.7
CCDC171-208ENST00000486641 BTN2A3PQ96KV6 586 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 RHOBTB2Q9BYZ6 727 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 ING2Q9H160 280 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 MRGBPQ9NV56 204 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 INTS10Q9NVR2 710 aaKnown RBP10.69□□□□□ -0.7
CCDC171-208ENST00000486641 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.69□□□□□ -0.7
CCDC171-208ENST00000486641 THG1LQ9NWX6 298 aaKnown RBP10.69□□□□□ -0.7
CCDC171-208ENST00000486641 GMIPQ9P107 970 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 GTF2IRD1Q9UHL9 959 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 ENPP5Q9UJA9 477 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 SCN9AQ15858 1988 aa10.69□□□□□ -0.7
CCDC171-208ENST00000486641 CLRN2A0PK11 232 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 KCNK1O00180 336 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 HTR1AP08908 422 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 FCGR1AP12314 374 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 IL7RP16871 459 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 GPX3P22352 226 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 SP2Q02086 613 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 DPY19L1Q2PZI1 675 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 GOLGA7BQ2TAP0 167 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 VPS26BQ4G0F5 336 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 OTUD3Q5T2D3 398 aaPredicted RBP10.68□□□□□ -0.7
CCDC171-208ENST00000486641 FAM182BQ5T319 152 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 SLC26A9Q7LBE3 791 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 PIWIL4Q7Z3Z4 852 aaKnown RBP10.68□□□□□ -0.7
CCDC171-208ENST00000486641 SCML4Q8N228 414 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 ZCCHC7Q8N3Z6 543 aaKnown RBP10.68□□□□□ -0.7
CCDC171-208ENST00000486641 GOLM1Q8NBJ4 401 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 SMG8Q8ND04 991 aaKnown RBP10.68□□□□□ -0.7
CCDC171-208ENST00000486641 PDZD8Q8NEN9 1154 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 DNERQ8NFT8 737 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 MAGED4Q96JG8 741 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 HOPXQ9BPY8 73 aaPredicted RBP10.68□□□□□ -0.7
CCDC171-208ENST00000486641 APOL2Q9BQE5 337 aa10.68□□□□□ -0.7
CCDC171-208ENST00000486641 RHOJQ9H4E5 214 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms