RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 DEFB124Q8NES8 71 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 ATL2Q8NHH9 583 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 UHMK1Q8TAS1 419 aaKnown RBP10.88□□□□□ -0.67
DDX56-212ENST00000485367 KRT35Q92764 455 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 ERP27Q96DN0 273 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 CFAP57Q96MR6 1250 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 FEM1AQ9BSK4 669 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 FAM192AQ9GZU8 254 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 BTBD1Q9H0C5 482 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 PCED1AQ9H1Q7 454 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 METTL5Q9NRN9 209 aaKnown RBP10.88□□□□□ -0.67
DDX56-212ENST00000485367 TMPRSS4Q9NRS4 437 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 FBXL12Q9NXK8 326 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 UVRAGQ9P2Y5 699 aa10.88□□□□□ -0.67
DDX56-212ENST00000485367 NKX1-2Q9UD57 310 aaPredicted RBP10.88□□□□□ -0.67
DDX56-212ENST00000485367 CHD8Q9HCK8 2581 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 I6L893 689 aaPredicted RBP10.87□□□□□ -0.67
DDX56-212ENST00000485367 ACACBO00763 2458 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 MID1O15344 667 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 BCAT2O15382 392 aaPredicted RBP10.87□□□□□ -0.67
DDX56-212ENST00000485367 OPHN1O60890 802 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 CLDN11O75508 207 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 CNTN5O94779 1100 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 ACSL3O95573 720 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 FTLP02792 175 aaPredicted RBP10.87□□□□□ -0.67
DDX56-212ENST00000485367 CYP1A1P04798 512 aaPredicted RBP10.87□□□□□ -0.67
DDX56-212ENST00000485367 C7P10643 843 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 PYGMP11217 842 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 CSRP1P21291 193 aaKnown RBP10.87□□□□□ -0.67
DDX56-212ENST00000485367 PTPN4P29074 926 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 VHLP40337 213 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 PSMD8P48556 350 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 SH3BGRP55822 239 aaPredicted RBP10.87□□□□□ -0.67
DDX56-212ENST00000485367 SF3A3Q12874 501 aaKnown RBP eCLIP10.87□□□□□ -0.671e-6■■■□□ 19.1
DDX56-212ENST00000485367 SNX1Q13596 522 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 SPARCL1Q14515 664 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 CST6Q15828 149 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 SLC45A4Q5BKX6 768 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 THEMIS2Q5TEJ8 643 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 HHATQ5VTY9 493 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 TRNP1Q6NT89 227 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 TRIM72Q6ZMU5 477 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 ARHGAP22Q7Z5H3 698 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 TDRPQ86YL5 185 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 STK40Q8N2I9 435 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 EMC1Q8N766 993 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 KNL1Q8NG31 2342 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 B4GALNT2Q8NHY0 566 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 GDAP1Q8TB36 358 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 FAM136AQ96C01 138 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 PGAP3Q96FM1 320 aaPredicted RBP10.87□□□□□ -0.67
DDX56-212ENST00000485367 PCDHB18PQ96TA0 734 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 C11orf70Q9BRQ4 267 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 MUC3BQ9H195 1237 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 SGK2Q9HBY8 427 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 EURLQ9NYK6 297 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 SCOCQ9UIL1 159 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 VPS28Q9UK41 221 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 BLOC1S6Q9UL45 172 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 TRIM33Q9UPN9 1127 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 PCNX2A6NKB5 2137 aa10.87□□□□□ -0.67
DDX56-212ENST00000485367 NYNRINQ9P2P1 1898 aaKnown RBP10.86□□□□□ -0.67
DDX56-212ENST00000485367 TP73O15350 636 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 RNASEH2AO75792 299 aaKnown RBP10.86□□□□□ -0.67
DDX56-212ENST00000485367 ZWINTO95229 277 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 ASMTLO95671 621 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 CYP1A2P05177 515 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 VAV1P15498 845 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 MMP8P22894 467 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 PTDSS1P48651 473 aaKnown RBP10.86□□□□□ -0.67
DDX56-212ENST00000485367 CDH4P55283 916 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 SFSWAPQ12872 951 aaKnown RBP10.86□□□□□ -0.67
DDX56-212ENST00000485367 GRIK2Q13002 908 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 MPP2Q14168 576 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 RASA2Q15283 850 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 MUM1Q2TAK8 710 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 C5orf22Q49AR2 442 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 ALFQ53S48 1182 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 UBAP2Q5T6F2 1119 aaKnown RBP10.86□□□□□ -0.67
DDX56-212ENST00000485367 USP30Q70CQ3 517 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 OR52K2Q8NGK3 314 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 SLC7A6OSQ96CW6 309 aaPredicted RBP10.86□□□□□ -0.67
DDX56-212ENST00000485367 ALG14Q96F25 216 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 FAM129BQ96TA1 746 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 OMDQ99983 421 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 TBC1D10AQ9BXI6 508 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 SLC32A1Q9H598 525 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 SEPT11Q9NVA2 429 aaKnown RBP10.86□□□□□ -0.67
DDX56-212ENST00000485367 ASIC3Q9UHC3 531 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 SLC25A13Q9UJS0 675 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 SCML1Q9UN30 329 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 CHKBQ9Y259 395 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 TBC1D30Q9Y2I9 924 aa10.86□□□□□ -0.67
DDX56-212ENST00000485367 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.86□□□□□ -0.67
DDX56-212ENST00000485367 A0A1W2PP55 124 aa10.85□□□□□ -0.67
DDX56-212ENST00000485367 NDC80O14777 642 aa10.85□□□□□ -0.67
DDX56-212ENST00000485367 NVLO15381 856 aaKnown RBP10.85□□□□□ -0.67
DDX56-212ENST00000485367 SPOPO43791 374 aa10.85□□□□□ -0.67
DDX56-212ENST00000485367 EDF1O60869 148 aaKnown RBP10.85□□□□□ -0.67
DDX56-212ENST00000485367 IL1BP01584 269 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms