RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 ZNF8P17098 575 aaPredicted RBP4.28□□□□□ -1.72
SCAF11-207ENST00000484275 EDN2P20800 178 aa4.28□□□□□ -1.72
SCAF11-207ENST00000484275 STX2P32856 288 aa4.28□□□□□ -1.72
SCAF11-207ENST00000484275 CLDN2P57739 230 aa4.28□□□□□ -1.72
SCAF11-207ENST00000484275 CTXN3Q4LDR2 81 aa4.28□□□□□ -1.72
SCAF11-207ENST00000484275 PPP6R3Q5H9R7 873 aaPredicted RBP4.28□□□□□ -1.72
SCAF11-207ENST00000484275 GFRALQ6UXV0 394 aa4.28□□□□□ -1.72
SCAF11-207ENST00000484275 CPXM2Q8N436 756 aa4.28□□□□□ -1.72
SCAF11-207ENST00000484275 BBS10Q8TAM1 723 aa4.28□□□□□ -1.72
SCAF11-207ENST00000484275 AFG1LQ8WV93 481 aa4.28□□□□□ -1.72
SCAF11-207ENST00000484275 STN1Q9H668 368 aaKnown RBP4.28□□□□□ -1.72
SCAF11-207ENST00000484275 DDX43Q9NXZ2 648 aaKnown RBP4.28□□□□□ -1.72
SCAF11-207ENST00000484275 CISD1Q9NZ45 108 aaKnown RBP4.28□□□□□ -1.72
SCAF11-207ENST00000484275 ATXN2Q99700 1313 aaKnown RBP4.27□□□□□ -1.73
SCAF11-207ENST00000484275 A0A1W2PS18 150 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 FAM72CH0Y354 149 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 PER2O15055 1255 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 CD53P19397 219 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 NR1H2P55055 460 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 ERVK11-1P61568 191 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 RUNX2Q13950 521 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 TRIM14Q14142 442 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 POSTNQ15063 836 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 MMEL1Q495T6 779 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 FAM72AQ5TYM5 149 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 FAM72DQ6L9T8 149 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 ANKRD54Q6NXT1 300 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 FAM122CQ6P4D5 195 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 CCNI2Q6ZMN8 369 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-207ENST00000484275 DGLUCYQ7Z3D6 616 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 TBC1D26Q86UD7 250 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 NOXA1Q86UR1 476 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 FAM72BQ86X60 149 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 TMEM219Q86XT9 240 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 CHERPQ8IWX8 916 aaKnown RBP4.27□□□□□ -1.73
SCAF11-207ENST00000484275 SLC20A1Q8WUM9 679 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 CNOT9Q92600 299 aaKnown RBP4.27□□□□□ -1.73
SCAF11-207ENST00000484275 OTULINQ96BN8 352 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 ALG14Q96F25 216 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 ZNF700Q9H0M5 742 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 DDX4Q9NQI0 724 aaKnown RBP4.27□□□□□ -1.73
SCAF11-207ENST00000484275 ABCF3Q9NUQ8 709 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 TAAR2Q9P1P5 351 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 GDAQ9Y2T3 454 aa4.27□□□□□ -1.73
SCAF11-207ENST00000484275 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.26□□□□□ -1.73
SCAF11-207ENST00000484275 ASPDHA6ND91 283 aa4.26□□□□□ -1.73
SCAF11-207ENST00000484275 ZNF883P0CG24 379 aa4.26□□□□□ -1.73
SCAF11-207ENST00000484275 RXRAP19793 462 aa4.26□□□□□ -1.73
SCAF11-207ENST00000484275 BLKP51451 505 aa4.26□□□□□ -1.73
SCAF11-207ENST00000484275 KRTAP10-3P60369 221 aa4.26□□□□□ -1.73
SCAF11-207ENST00000484275 ACTR2P61160 394 aa4.26□□□□□ -1.73
SCAF11-207ENST00000484275 EDRF1Q3B7T1 1238 aa4.26□□□□□ -1.73
SCAF11-207ENST00000484275 CCDC174Q6PII3 467 aa4.26□□□□□ -1.73
SCAF11-207ENST00000484275 MOGAT3Q86VF5 341 aa4.26□□□□□ -1.73
SCAF11-207ENST00000484275 MYLK4Q86YV6 388 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-207ENST00000484275 TMEM57Q8N5G2 664 aa4.26□□□□□ -1.73
SCAF11-207ENST00000484275 VPS37AQ8NEZ2 397 aa4.26□□□□□ -1.73
SCAF11-207ENST00000484275 DMBX1Q8NFW5 382 aa4.26□□□□□ -1.73
SCAF11-207ENST00000484275 HAUS8Q9BT25 410 aa4.26□□□□□ -1.73
SCAF11-207ENST00000484275 EPHX3Q9H6B9 360 aa4.26□□□□□ -1.73
SCAF11-207ENST00000484275 C17orf75Q9HAS0 396 aa4.26□□□□□ -1.73
SCAF11-207ENST00000484275 FEM1BQ9UK73 627 aa4.26□□□□□ -1.73
SCAF11-207ENST00000484275 RALYQ9UKM9 306 aaKnown RBP4.26□□□□□ -1.73
SCAF11-207ENST00000484275 DAAM1Q9Y4D1 1078 aa4.26□□□□□ -1.73
SCAF11-207ENST00000484275 ARHGAP10A1A4S6 786 aa4.25□□□□□ -1.73
SCAF11-207ENST00000484275 PTPN2P17706 415 aa4.25□□□□□ -1.73
SCAF11-207ENST00000484275 GPTP24298 496 aa4.25□□□□□ -1.73
SCAF11-207ENST00000484275 CHATP28329 748 aa4.25□□□□□ -1.73
SCAF11-207ENST00000484275 NR0B1P51843 470 aaKnown RBP4.25□□□□□ -1.73
SCAF11-207ENST00000484275 CHRNDQ07001 517 aa4.25□□□□□ -1.73
SCAF11-207ENST00000484275 LRRC8EQ6NSJ5 796 aa4.25□□□□□ -1.73
SCAF11-207ENST00000484275 NFE4Q86UQ8 179 aa4.25□□□□□ -1.73
SCAF11-207ENST00000484275 KIAA2013Q8IYS2 634 aa4.25□□□□□ -1.73
SCAF11-207ENST00000484275 ZNF485Q8NCK3 441 aa4.25□□□□□ -1.73
SCAF11-207ENST00000484275 KCNH5Q8NCM2 988 aa4.25□□□□□ -1.73
SCAF11-207ENST00000484275 SLC24A4Q8NFF2 622 aa4.25□□□□□ -1.73
SCAF11-207ENST00000484275 CEP70Q8NHQ1 597 aa4.25□□□□□ -1.73
SCAF11-207ENST00000484275 SLC39A13Q96H72 371 aa4.25□□□□□ -1.73
SCAF11-207ENST00000484275 ZC3HAV1LQ96H79 300 aaKnown RBP4.25□□□□□ -1.73
SCAF11-207ENST00000484275 MXRA8Q9BRK3 442 aa4.25□□□□□ -1.73
SCAF11-207ENST00000484275 KCNN2Q9H2S1 579 aa4.25□□□□□ -1.73
SCAF11-207ENST00000484275 MROH8Q9H579 483 aa4.25□□□□□ -1.73
SCAF11-207ENST00000484275 KIF17Q9P2E2 1029 aa4.25□□□□□ -1.73
SCAF11-207ENST00000484275 CAPN9O14815 690 aa4.24□□□□□ -1.73
SCAF11-207ENST00000484275 WEE2P0C1S8 567 aa4.24□□□□□ -1.73
SCAF11-207ENST00000484275 ITGA2P17301 1181 aa4.24□□□□□ -1.73
SCAF11-207ENST00000484275 EIF2S3P41091 472 aaKnown RBP4.24□□□□□ -1.73
SCAF11-207ENST00000484275 MTSS1LQ765P7 747 aa4.24□□□□□ -1.73
SCAF11-207ENST00000484275 MYPOPQ86VE0 399 aaPredicted RBP4.24□□□□□ -1.73
SCAF11-207ENST00000484275 TAS1R2Q8TE23 839 aa4.24□□□□□ -1.73
SCAF11-207ENST00000484275 DUSP19Q8WTR2 217 aa4.24□□□□□ -1.73
SCAF11-207ENST00000484275 KXD1Q9BQD3 176 aa4.24□□□□□ -1.73
SCAF11-207ENST00000484275 RBM4Q9BWF3 364 aaKnown RBP4.24□□□□□ -1.73
SCAF11-207ENST00000484275 ESRP2Q9H6T0 727 aaKnown RBP4.24□□□□□ -1.73
SCAF11-207ENST00000484275 PLEKHA5Q9HAU0 1116 aa4.24□□□□□ -1.73
SCAF11-207ENST00000484275 CNGB3Q9NQW8 809 aa4.24□□□□□ -1.73
SCAF11-207ENST00000484275 SMYD2Q9NRG4 433 aa4.24□□□□□ -1.73
SCAF11-207ENST00000484275 TMEM30AQ9NV96 361 aa4.24□□□□□ -1.73
SCAF11-207ENST00000484275 RRP7AQ9Y3A4 280 aaKnown RBP4.24□□□□□ -1.73
SCAF11-207ENST00000484275 LILRA5A6NI73 299 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms