RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 SMYD5Q6GMV2 418 aa12.97□□□□□ -0.33
UBR4-213ENST00000483922 TAF8Q7Z7C8 310 aa12.97□□□□□ -0.33
UBR4-213ENST00000483922 ZNF564Q8TBZ8 553 aaPredicted RBP12.97□□□□□ -0.33
UBR4-213ENST00000483922 GDAP1L1Q96MZ0 367 aa12.97□□□□□ -0.33
UBR4-213ENST00000483922 NUDT22Q9BRQ3 303 aa12.97□□□□□ -0.33
UBR4-213ENST00000483922 C1QTNF7Q9BXJ2 289 aa12.97□□□□□ -0.33
UBR4-213ENST00000483922 FHOD1Q9Y613 1164 aa12.97□□□□□ -0.33
UBR4-213ENST00000483922 IGHV5-10-1A0A0J9YXX1 117 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 C2CD4BA6NLJ0 364 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 B4DGG1 531 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 FGF1P05230 155 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 CHRNB2P17787 502 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 HTR1BP28222 390 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 CD1CP29017 333 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 TRIM23P36406 574 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 ETFBP38117 255 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 MMP12P39900 470 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 MAZP56270 477 aaKnown RBP12.96□□□□□ -0.33
UBR4-213ENST00000483922 GEMIN4P57678 1058 aaKnown RBP12.96□□□□□ -0.33
UBR4-213ENST00000483922 RHOAP61586 193 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 FOXK1P85037 733 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 PTP4A2Q12974 167 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 NAA35Q5VZE5 725 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 SPECC1LQ69YQ0 1117 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 CAMK1DQ8IU85 385 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 OR56A4Q8NGH8 313 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 HCAR2Q8TDS4 363 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 SLC20A1Q8WUM9 679 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 TMEM159Q96B96 161 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 TBC1D31Q96DN5 1066 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 CMKLR1Q99788 373 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 SUV39H2Q9H5I1 410 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 RETREG1Q9H6L5 497 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 PDFQ9HBH1 243 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 TMEM51Q9NW97 253 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 HPCAL4Q9UM19 191 aa12.96□□□□□ -0.33
UBR4-213ENST00000483922 ANKRD36A6QL64 1941 aa12.96□□□□□ -0.34
UBR4-213ENST00000483922 J3KR12 359 aa12.95□□□□□ -0.34
UBR4-213ENST00000483922 NUDT21O43809 227 aaKnown RBP12.95□□□□□ -0.34
UBR4-213ENST00000483922 FGFR1OPO95684 399 aaKnown RBP12.95□□□□□ -0.34
UBR4-213ENST00000483922 IGSF6O95976 241 aa12.95□□□□□ -0.34
UBR4-213ENST00000483922 LIFP15018 202 aa12.95□□□□□ -0.34
UBR4-213ENST00000483922 CR2P20023 1033 aa12.95□□□□□ -0.34
UBR4-213ENST00000483922 POLE2P56282 527 aa12.95□□□□□ -0.34
UBR4-213ENST00000483922 BPIFB4P59827 614 aa12.95□□□□□ -0.34
UBR4-213ENST00000483922 MTM1Q13496 603 aa12.95□□□□□ -0.34
UBR4-213ENST00000483922 SERINC3Q13530 473 aa12.95□□□□□ -0.34
UBR4-213ENST00000483922 KLHDC7AQ5VTJ3 777 aa12.95□□□□□ -0.34
UBR4-213ENST00000483922 ZNF438Q7Z4V0 828 aa12.95□□□□□ -0.34
UBR4-213ENST00000483922 RTL3Q8N8U3 475 aaKnown RBP12.95□□□□□ -0.34
UBR4-213ENST00000483922 SLC30A5Q8TAD4 765 aa12.95□□□□□ -0.34
UBR4-213ENST00000483922 PATE1Q8WXA2 126 aa12.95□□□□□ -0.34
UBR4-213ENST00000483922 PSMG3-AS1Q96PY0 264 aa12.95□□□□□ -0.34
UBR4-213ENST00000483922 SPRY4Q9C004 299 aa12.95□□□□□ -0.34
UBR4-213ENST00000483922 B3GNT4Q9C0J1 378 aa12.95□□□□□ -0.34
UBR4-213ENST00000483922 PDCL3Q9H2J4 239 aa12.95□□□□□ -0.34
UBR4-213ENST00000483922 DPEP2Q9H4A9 486 aa12.95□□□□□ -0.34
UBR4-213ENST00000483922 TMEM9Q9P0T7 183 aa12.95□□□□□ -0.34
UBR4-213ENST00000483922 NOCTQ9UK39 431 aaKnown RBP12.95□□□□□ -0.34
UBR4-213ENST00000483922 PCDHB11Q9Y5F2 797 aa12.95□□□□□ -0.34
UBR4-213ENST00000483922 NBASA2RRP1 2371 aa12.95□□□□□ -0.34
UBR4-213ENST00000483922 RASA4BC9J798 803 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 PPM1DO15297 605 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 NKX2-8O15522 239 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 RASA4O43374 803 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 RECQL5O94762 991 aaPredicted RBP12.94□□□□□ -0.34
UBR4-213ENST00000483922 CPNE6O95741 557 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 CYP1A1P04798 512 aaPredicted RBP12.94□□□□□ -0.34
UBR4-213ENST00000483922 HOXC4P09017 264 aaPredicted RBP12.94□□□□□ -0.34
UBR4-213ENST00000483922 GP1BBP13224 206 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 MMP8P22894 467 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 MPSTP25325 297 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 CD82P27701 267 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 RFC1P35251 1148 aaPredicted RBP12.94□□□□□ -0.34
UBR4-213ENST00000483922 UGT1A3P35503 534 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 PTPN9P43378 593 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 SUOXP51687 545 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 KIAA1024LP59773 190 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 RAD51Q06609 339 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 ELP6Q0PNE2 266 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 KCNAB2Q13303 367 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 ARHGEF7Q14155 803 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 NR1D2Q14995 579 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 AMZ1Q400G9 498 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 NKAIN2Q5VXU1 208 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 HIST2H2BCQ6DN03 193 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 BORAQ6PGQ7 559 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 LIPIQ6XZB0 460 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 STRADAQ7RTN6 431 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 ZSCAN1Q8NBB4 408 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 GPBAR1Q8TDU6 330 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 EPS8L1Q8TE68 723 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 CASKIN2Q8WXE0 1202 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 CCDC74BQ96LY2 380 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 PCDHB18PQ96TA0 734 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 ADNPQ9H2P0 1102 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 CYP4F12Q9HCS2 524 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 OCIAD1Q9NX40 245 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 MAN2B2Q9Y2E5 1009 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 PCDHGA3Q9Y5H0 932 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms