RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 CHD5Q8TDI0 1954 aa10.5□□□□□ -0.73
APTX-225ENST00000482687 TRANK1O15050 2925 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.49□□□□□ -0.73
APTX-225ENST00000482687 XYLBO75191 536 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 SMIM18P0DKX4 95 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 CEBPBP17676 345 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 TPH1P17752 444 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 PGM1P36871 562 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 ACTR3P61158 418 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 ZNF177Q13360 481 aaPredicted RBP10.49□□□□□ -0.73
APTX-225ENST00000482687 RASA2Q15283 850 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 CASC4Q6P4E1 433 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 PGBD5Q8N414 524 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 ITFG1Q8TB96 612 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 WFDC5Q8TCV5 224 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 ZNF707Q96C28 371 aaPredicted RBP10.49□□□□□ -0.73
APTX-225ENST00000482687 ITPKCQ96DU7 683 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 TMA16Q96EY4 203 aaKnown RBP10.49□□□□□ -0.73
APTX-225ENST00000482687 SIGLEC10Q96LC7 697 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 BTBD9Q96Q07 612 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 GDF15Q99988 308 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 PRKD2Q9BZL6 878 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 EBF3Q9H4W6 596 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 SLC28A3Q9HAS3 691 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 SLCO1B3Q9NPD5 702 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 TAS2R1Q9NYW7 299 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 MTO1Q9Y2Z2 717 aaKnown RBP10.49□□□□□ -0.73
APTX-225ENST00000482687 RANBP2P49792 3224 aaKnown RBP10.49□□□□□ -0.73
APTX-225ENST00000482687 ARHGAP10A1A4S6 786 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 H0Y626 953 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 TPD52L2O43399 206 aaKnown RBP10.49□□□□□ -0.73
APTX-225ENST00000482687 PMPCBO75439 489 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 CLDN11O75508 207 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 AP2A1O95782 977 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 MZF1P28698 734 aaPredicted RBP10.49□□□□□ -0.73
APTX-225ENST00000482687 AVPR1AP37288 418 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 EPHA5P54756 1037 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 GEMIN4P57678 1058 aaKnown RBP10.49□□□□□ -0.73
APTX-225ENST00000482687 CDK16Q00536 496 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 DSC2Q02487 901 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 NIPAL4Q0D2K0 466 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 PRPSAP1Q14558 356 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 PCSK7Q16549 785 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 CLPPQ16740 277 aaPredicted RBP10.49□□□□□ -0.73
APTX-225ENST00000482687 ANO4Q32M45 955 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 PARP15Q460N3 678 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 ARHGAP15Q53QZ3 475 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 PRSS36Q5K4E3 855 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 MARC1Q5VT66 337 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 CXorf57Q6NSI4 855 aaKnown RBP10.49□□□□□ -0.73
APTX-225ENST00000482687 LRRC8BQ6P9F7 803 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 CES3Q6UWW8 571 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 KYAT3Q6YP21 454 aaKnown RBP10.49□□□□□ -0.73
APTX-225ENST00000482687 LRRC6Q86X45 466 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 RNF135Q8IUD6 432 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 CMTM8Q8IZV2 173 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 ATP11CQ8NB49 1132 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 IPMKQ8NFU5 416 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 DDI1Q8WTU0 396 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 SMG7Q92540 1137 aaKnown RBP10.49□□□□□ -0.73
APTX-225ENST00000482687 SPOCK2Q92563 424 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 USP13Q92995 863 aaPredicted RBP10.49□□□□□ -0.73
APTX-225ENST00000482687 VAT1Q99536 393 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 MUC3BQ9H195 1237 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 PLAC1Q9HBJ0 212 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 SYBUQ9NX95 663 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 ZC3H7BQ9UGR2 993 aaKnown RBP10.49□□□□□ -0.73
APTX-225ENST00000482687 RABGEF1Q9UJ41 708 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 CLEC4EQ9ULY5 219 aa10.49□□□□□ -0.73
APTX-225ENST00000482687 EXOC1LA0A1B0GW35 172 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 CCDC78A2IDD5 438 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 HTR3EA5X5Y0 456 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 CBX4O00257 560 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 SNAP91O60641 907 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 PRAMEF11O60813 436 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 SPAG7O75391 227 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 TGDSO95455 350 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 PRAMEF12O95522 483 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 IL1BP01584 269 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 HNRNPA1P09651 372 aaKnown RBP eCLIP10.48□□□□□ -0.73
APTX-225ENST00000482687 ESRRAP11474 423 aaPredicted RBP10.48□□□□□ -0.73
APTX-225ENST00000482687 GCAP28676 217 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 MAGEA3P43357 314 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 GALK1P51570 392 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 YBEYP58557 167 aaPredicted RBP10.48□□□□□ -0.73
APTX-225ENST00000482687 ZNF33AQ06730 810 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 IL10RBQ08334 325 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 BCL2A1Q16548 175 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 DUSP6Q16828 381 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 ANKRD20A4Q4UJ75 823 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 CERCAMQ5T4B2 595 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 KCTD11Q693B1 232 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 GRAMD4Q6IC98 578 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 PDE12Q6L8Q7 609 aaKnown RBP10.48□□□□□ -0.73
APTX-225ENST00000482687 DHRS4L2Q6PKH6 230 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 UGT2A3Q6UWM9 527 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 LINGO4Q6UY18 593 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 RBM44Q6ZP01 1051 aaKnown RBP10.48□□□□□ -0.73
APTX-225ENST00000482687 HTR3DQ70Z44 454 aa10.48□□□□□ -0.73
APTX-225ENST00000482687 PRPF39Q86UA1 669 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms