RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 OR14C36Q8NHC7 312 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 PDCD6IPQ8WUM4 868 aaKnown RBP12.31□□□□□ -0.44
TRA2B-212ENST00000480461 NAP1L3Q99457 506 aaPredicted RBP12.31□□□□□ -0.44
TRA2B-212ENST00000480461 GPR174Q9BXC1 333 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 TDRD1Q9BXT4 1180 aaKnown RBP12.31□□□□□ -0.44
TRA2B-212ENST00000480461 DDX47Q9H0S4 455 aaKnown RBP12.31□□□□□ -0.44
TRA2B-212ENST00000480461 DUSP15Q9H1R2 295 aaPredicted RBP12.31□□□□□ -0.44
TRA2B-212ENST00000480461 C6orf106Q9H6K1 298 aaPredicted RBP12.31□□□□□ -0.44
TRA2B-212ENST00000480461 EBF2Q9HAK2 575 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 ETNK1Q9HBU6 452 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 PCDH12Q9NPG4 1184 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 HOMER3Q9NSC5 361 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 RSPH14Q9UHP6 348 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 FZD4Q9ULV1 537 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 ZFR2Q9UPR6 939 aaKnown RBP12.31□□□□□ -0.44
TRA2B-212ENST00000480461 PPIL1Q9Y3C6 166 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 SLCO1B1Q9Y6L6 691 aa12.31□□□□□ -0.44
TRA2B-212ENST00000480461 FREM2Q5SZK8 3169 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 LOC285095A0A1B0GVY8 99 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 LNP1A1A4G5 178 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 CFAP69A5D8W1 941 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 A8MX80 341 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 TAF4O00268 1085 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 RIOK3O14730 519 aaKnown RBP12.3□□□□□ -0.44
TRA2B-212ENST00000480461 PLRG1O43660 514 aaKnown RBP12.3□□□□□ -0.44
TRA2B-212ENST00000480461 PHF2O75151 1096 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 SOCS5O75159 536 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 URI1O94763 535 aaPredicted RBP12.3□□□□□ -0.44
TRA2B-212ENST00000480461 CTPS1P17812 591 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 OXTRP30559 389 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 ADRA1AP35348 466 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 PTGER3P43115 390 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 NEK3P51956 506 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 WNT3AP56704 352 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 SPARCL1Q14515 664 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 NUMA1Q14980 2115 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 TRIP13Q15645 432 aaPredicted RBP12.3□□□□□ -0.44
TRA2B-212ENST00000480461 PCSK7Q16549 785 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 CDKN3Q16667 212 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 P3H1Q32P28 736 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 TTC31Q49AM3 519 aaPredicted RBP12.3□□□□□ -0.44
TRA2B-212ENST00000480461 SYCP2LQ5T4T6 812 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 KCTD11Q693B1 232 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 FBXL19Q6PCT2 694 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 BRAT1Q6PJG6 821 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 CCDC137Q6PK04 289 aaKnown RBP12.3□□□□□ -0.44
TRA2B-212ENST00000480461 RANBP10Q6VN20 620 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 CBARPQ8N350 705 aaPredicted RBP12.3□□□□□ -0.44
TRA2B-212ENST00000480461 SPATA4Q8NEY3 305 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 ORAI3Q9BRQ5 295 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 BTBD1Q9H0C5 482 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 PCDH9Q9HC56 1237 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 RNF14Q9UBS8 474 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 FAM153AQ9UHL3 310 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 CDC23Q9UJX2 597 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 NCKAP1Q9Y2A7 1128 aa12.3□□□□□ -0.44
TRA2B-212ENST00000480461 TBC1D3DA0A087WVF3 549 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 TBC1D3IA0A087WXS9 549 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 TBC1D3EA0A087X179 549 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 TBC1D3KA0A087X1G2 549 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 TBC1D3FA6NER0 549 aaPredicted RBP12.29□□□□□ -0.44
TRA2B-212ENST00000480461 FAM47DPA6NHR8 397 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 METTL12A8MUP2 240 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 UPK3BL1B0FP48 263 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 TBC1D3LB9A6J9 549 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 UPK3BL2E5RIL1 263 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 SLC7A4O43246 635 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 ZNF500O60304 480 aaPredicted RBP12.29□□□□□ -0.44
TRA2B-212ENST00000480461 SEMA4FO95754 770 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 TUBB4AP04350 444 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 IGHV4-34P06331 123 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 ALPIP09923 528 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 ATXN1LP0C7T5 689 aaKnown RBP12.29□□□□□ -0.44
TRA2B-212ENST00000480461 TBC1D3HP0C7X1 549 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 CEACAM1P13688 526 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 GM2AP17900 193 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 HNF1BP35680 557 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 CHRNA4P43681 627 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 PPP2CBP62714 309 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 PPP2CAP67775 309 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 MRPS25P82663 173 aaKnown RBP12.29□□□□□ -0.44
TRA2B-212ENST00000480461 CDK18Q07002 472 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 RALGDSQ12967 914 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 MSLNQ13421 630 aaPredicted RBP12.29□□□□□ -0.44
TRA2B-212ENST00000480461 FGL2Q14314 439 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 SLC14A2Q15849 920 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 QPCTQ16769 361 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 ARMC12Q5T9G4 340 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 TBC1D3GQ6DHY5 549 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 TBC1D3CQ6IPX1 549 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 DENND5AQ6IQ26 1287 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 ZNF572Q7Z3I7 529 aaPredicted RBP12.29□□□□□ -0.44
TRA2B-212ENST00000480461 KLHL7Q8IXQ5 586 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 TBC1D3Q8IZP1 549 aaPredicted RBP12.29□□□□□ -0.44
TRA2B-212ENST00000480461 BIRC7Q96CA5 298 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 EID2BQ96D98 161 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 PPP1R16AQ96I34 528 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 APOL2Q9BQE5 337 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 SGK2Q9HBY8 427 aa12.29□□□□□ -0.44
TRA2B-212ENST00000480461 PCYOX1Q9UHG3 505 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms