RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 SLC1A1P43005 524 aa15.75■□□□□ 0.11
HDLBP-238ENST00000479894 CD97P48960 835 aa15.75■□□□□ 0.11
HDLBP-238ENST00000479894 CXCR3P49682 368 aa15.75■□□□□ 0.11
HDLBP-238ENST00000479894 HADHBP55084 474 aaKnown RBP15.75■□□□□ 0.11
HDLBP-238ENST00000479894 NAP1L1P55209 391 aaKnown RBP15.75■□□□□ 0.11
HDLBP-238ENST00000479894 NME3Q13232 169 aa15.75■□□□□ 0.11
HDLBP-238ENST00000479894 PTK2BQ14289 1009 aa15.75■□□□□ 0.11
HDLBP-238ENST00000479894 FGL2Q14314 439 aa15.75■□□□□ 0.11
HDLBP-238ENST00000479894 HADHQ16836 314 aaKnown RBP15.75■□□□□ 0.11
HDLBP-238ENST00000479894 CCDC14Q49A88 953 aa15.75■□□□□ 0.11
HDLBP-238ENST00000479894 RNF10Q8N5U6 811 aaKnown RBP15.75■□□□□ 0.11
HDLBP-238ENST00000479894 NIPA2Q8N8Q9 360 aa15.75■□□□□ 0.11
HDLBP-238ENST00000479894 OR6C4Q8NGE1 309 aa15.75■□□□□ 0.11
HDLBP-238ENST00000479894 FAM172AQ8WUF8 416 aa15.75■□□□□ 0.11
HDLBP-238ENST00000479894 PPP1R16AQ96I34 528 aa15.75■□□□□ 0.11
HDLBP-238ENST00000479894 FEM1CQ96JP0 617 aa15.75■□□□□ 0.11
HDLBP-238ENST00000479894 CFAP57Q96MR6 1250 aa15.75■□□□□ 0.11
HDLBP-238ENST00000479894 FEM1AQ9BSK4 669 aa15.75■□□□□ 0.11
HDLBP-238ENST00000479894 ADGRG1Q9Y653 693 aa15.75■□□□□ 0.11
HDLBP-238ENST00000479894 ABCA12Q86UK0 2595 aa15.75■□□□□ 0.11
HDLBP-238ENST00000479894 YY2O15391 372 aa15.74■□□□□ 0.11
HDLBP-238ENST00000479894 SPINT1O43278 529 aa15.74■□□□□ 0.11
HDLBP-238ENST00000479894 ATMINO43313 823 aaPredicted RBP15.74■□□□□ 0.11
HDLBP-238ENST00000479894 BNIP3LO60238 219 aa15.74■□□□□ 0.11
HDLBP-238ENST00000479894 PAK4O96013 591 aaPredicted RBP15.74■□□□□ 0.11
HDLBP-238ENST00000479894 MAN1A1P33908 653 aa15.74■□□□□ 0.11
HDLBP-238ENST00000479894 ZNF135P52742 658 aaPredicted RBP15.74■□□□□ 0.11
HDLBP-238ENST00000479894 PFN3P60673 137 aa15.74■□□□□ 0.11
HDLBP-238ENST00000479894 RPL7AP62424 266 aaKnown RBP15.74■□□□□ 0.11
HDLBP-238ENST00000479894 CCZ1BP86790 482 aa15.74■□□□□ 0.11
HDLBP-238ENST00000479894 CCZ1P86791 482 aaPredicted RBP15.74■□□□□ 0.11
HDLBP-238ENST00000479894 ATP11AP98196 1134 aa15.74■□□□□ 0.11
HDLBP-238ENST00000479894 PRRT3Q5FWE3 981 aa15.74■□□□□ 0.11
HDLBP-238ENST00000479894 RABGAP1LQ5R372 815 aa15.74■□□□□ 0.11
HDLBP-238ENST00000479894 ZNF662Q6ZS27 426 aa15.74■□□□□ 0.11
HDLBP-238ENST00000479894 ZFAND4Q86XD8 727 aa15.74■□□□□ 0.11
HDLBP-238ENST00000479894 PSTKQ8IV42 348 aaKnown RBP15.74■□□□□ 0.11
HDLBP-238ENST00000479894 EMC1Q8N766 993 aa15.74■□□□□ 0.11
HDLBP-238ENST00000479894 ARL10Q8N8L6 244 aa15.74■□□□□ 0.11
HDLBP-238ENST00000479894 DENND6BQ8NEG7 585 aa15.74■□□□□ 0.11
HDLBP-238ENST00000479894 OR2A12Q8NGT7 310 aa15.74■□□□□ 0.11
HDLBP-238ENST00000479894 JOSD2Q8TAC2 188 aa15.74■□□□□ 0.11
HDLBP-238ENST00000479894 ASB12Q8WXK4 309 aa15.74■□□□□ 0.11
HDLBP-238ENST00000479894 CATSPER2Q96P56 530 aa15.74■□□□□ 0.11
HDLBP-238ENST00000479894 TBCBQ99426 244 aa15.74■□□□□ 0.11
HDLBP-238ENST00000479894 KLF6Q99612 283 aaPredicted RBP15.74■□□□□ 0.11
HDLBP-238ENST00000479894 EPAS1Q99814 870 aa15.74■□□□□ 0.11
HDLBP-238ENST00000479894 PRMT1Q99873 361 aaKnown RBP15.74■□□□□ 0.11
HDLBP-238ENST00000479894 LRRC61Q9BV99 259 aa15.74■□□□□ 0.11
HDLBP-238ENST00000479894 FOXP3Q9BZS1 431 aa15.74■□□□□ 0.11
HDLBP-238ENST00000479894 OR51B4Q9Y5P0 310 aa15.74■□□□□ 0.11
HDLBP-238ENST00000479894 LRP4O75096 1905 aa15.74■□□□□ 0.11
HDLBP-238ENST00000479894 C2CD3Q4AC94 2353 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 MED13Q9UHV7 2174 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 A0A1W2PQM1 296 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 GOLGA6L9A6NEM1 432 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 RAD51BO15315 384 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 AP1G1O43747 822 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 PRPSAP2O60256 369 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 PROSCO94903 275 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 RPLP0P05388 317 aaKnown RBP15.73■□□□□ 0.11
HDLBP-238ENST00000479894 SRCP12931 536 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 NUMBP49757 651 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 NEK3P51956 506 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 CCL7P80098 99 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 ZFP36L1Q07352 338 aaKnown RBP15.73■□□□□ 0.11
HDLBP-238ENST00000479894 BOLA3Q53S33 107 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 TPRG1LQ5T0D9 272 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 LVRNQ6Q4G3 990 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 PHACTR4Q8IZ21 702 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 SYCE1Q8N0S2 351 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 RBFAQ8N0V3 343 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 SDR16C5Q8N3Y7 309 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 NTAN1Q96AB6 310 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 MIB2Q96AX9 1013 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 C1orf74Q96LT6 269 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 HAPLN3Q96S86 360 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 CMKLR1Q99788 373 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 PACSIN1Q9BY11 444 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 SLC13A1Q9BZW2 595 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 LRRN3Q9H3W5 708 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 RETREG1Q9H6L5 497 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 DONSONQ9NYP3 566 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 FOXJ2Q9P0K8 574 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 RABGEF1Q9UJ41 708 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 CHD5Q8TDI0 1954 aa15.73■□□□□ 0.11
HDLBP-238ENST00000479894 ARHGEF17Q96PE2 2063 aaPredicted RBP15.72■□□□□ 0.11
HDLBP-238ENST00000479894 SYNJ2BP-COX16A0A087WUM0 186 aa15.72■□□□□ 0.11
HDLBP-238ENST00000479894 KCNU1A8MYU2 1149 aa15.72■□□□□ 0.11
HDLBP-238ENST00000479894 C9orf172C9J069 976 aa15.72■□□□□ 0.11
HDLBP-238ENST00000479894 TOR1BO14657 336 aa15.72■□□□□ 0.11
HDLBP-238ENST00000479894 ITIH1P19827 911 aa15.72■□□□□ 0.11
HDLBP-238ENST00000479894 MSNP26038 577 aaKnown RBP15.72■□□□□ 0.11
HDLBP-238ENST00000479894 HTR7P34969 479 aa15.72■□□□□ 0.11
HDLBP-238ENST00000479894 CLCN6P51797 869 aa15.72■□□□□ 0.11
HDLBP-238ENST00000479894 SGCGQ13326 291 aa15.72■□□□□ 0.11
HDLBP-238ENST00000479894 C1orf61Q13536 156 aa15.72■□□□□ 0.11
HDLBP-238ENST00000479894 EIF4EBP2Q13542 120 aaPredicted RBP15.72■□□□□ 0.11
HDLBP-238ENST00000479894 CDO1Q16878 200 aa15.72■□□□□ 0.11
HDLBP-238ENST00000479894 ZC3H12AQ5D1E8 599 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms