RNA–Protein interactions for RNA: ENST00000477891.1

MINDY3-206, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 1 (best)

Gene MINDY3, Length 2,307 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-206ENST00000477891 PLXNA3P51805 1871 aa10.57□□□□□ -0.72
MINDY3-206ENST00000477891 A0A1W2PQ45 241 aaPredicted RBP10.57□□□□□ -0.72
MINDY3-206ENST00000477891 A0A1W2PQY0 241 aa10.57□□□□□ -0.72
MINDY3-206ENST00000477891 TCAF2A6NFQ2 919 aa10.57□□□□□ -0.72
MINDY3-206ENST00000477891 OR6C75A6NL08 312 aa10.57□□□□□ -0.72
MINDY3-206ENST00000477891 H3BNX3 289 aa10.57□□□□□ -0.72
MINDY3-206ENST00000477891 UBFD1O14562 309 aaKnown RBP10.57□□□□□ -0.72
MINDY3-206ENST00000477891 CFLARO15519 480 aa10.57□□□□□ -0.72
MINDY3-206ENST00000477891 TBC1D4O60343 1298 aa10.57□□□□□ -0.72
MINDY3-206ENST00000477891 WISP3O95389 354 aaPredicted RBP10.57□□□□□ -0.72
MINDY3-206ENST00000477891 PRSS56P0CW18 603 aa10.57□□□□□ -0.72
MINDY3-206ENST00000477891 SLC6A4P31645 630 aa10.57□□□□□ -0.72
MINDY3-206ENST00000477891 THOP1P52888 689 aa10.57□□□□□ -0.72
MINDY3-206ENST00000477891 PKNOX1P55347 436 aa10.57□□□□□ -0.72
MINDY3-206ENST00000477891 TNK2Q07912 1038 aa10.57□□□□□ -0.72
MINDY3-206ENST00000477891 SEMA3AQ14563 771 aa10.57□□□□□ -0.72
MINDY3-206ENST00000477891 PPP1R3AQ16821 1122 aa10.57□□□□□ -0.72
MINDY3-206ENST00000477891 TCTN1Q2MV58 587 aa10.57□□□□□ -0.72
MINDY3-206ENST00000477891 LHX8Q68G74 356 aa10.57□□□□□ -0.72
MINDY3-206ENST00000477891 ZNF549Q6P9A3 640 aa10.57□□□□□ -0.72
MINDY3-206ENST00000477891 PRSS55Q6UWB4 352 aaPredicted RBP10.57□□□□□ -0.72
MINDY3-206ENST00000477891 ADGRG6Q86SQ4 1221 aa10.57□□□□□ -0.72
MINDY3-206ENST00000477891 DHDDSQ86SQ9 333 aa10.57□□□□□ -0.72
MINDY3-206ENST00000477891 OR13C4Q8NGS5 318 aa10.57□□□□□ -0.72
MINDY3-206ENST00000477891 SPPL2BQ8TCT7 592 aa10.57□□□□□ -0.72
MINDY3-206ENST00000477891 GATA6Q92908 595 aa10.57□□□□□ -0.72
MINDY3-206ENST00000477891 ALG9Q9H6U8 611 aa10.57□□□□□ -0.72
MINDY3-206ENST00000477891 DONSONQ9NYP3 566 aa10.57□□□□□ -0.72
MINDY3-206ENST00000477891 ADAM12O43184 909 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 PRAMEF11O60813 436 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 AOC2O75106 756 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 RTN3O95197 1032 aaPredicted RBP10.56□□□□□ -0.72
MINDY3-206ENST00000477891 GOT2P00505 430 aaKnown RBP10.56□□□□□ -0.72
MINDY3-206ENST00000477891 SLC4A1P02730 911 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 ZDHHC11BP0C7U3 371 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 ATF6P18850 670 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 TACR2P21452 398 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 MRPS35P82673 323 aaKnown RBP10.56□□□□□ -0.72
MINDY3-206ENST00000477891 MS4A2Q01362 244 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 DSG1Q02413 1049 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 ACAP2Q15057 778 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 PARP15Q460N3 678 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 FUT10Q6P4F1 479 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 CYHR1Q6ZMK1 362 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 LGI2Q8N0V4 545 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 HMGCLL1Q8TB92 370 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 USP13Q92995 863 aaPredicted RBP10.56□□□□□ -0.72
MINDY3-206ENST00000477891 PTERQ96BW5 349 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 NPAS2Q99743 824 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 DDX50Q9BQ39 737 aaKnown RBP10.56□□□□□ -0.72
MINDY3-206ENST00000477891 POLR1EQ9GZS1 481 aaKnown RBP10.56□□□□□ -0.72
MINDY3-206ENST00000477891 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.56□□□□□ -0.72
MINDY3-206ENST00000477891 PDFQ9HBH1 243 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 STARD7Q9NQZ5 370 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 OLA1Q9NTK5 396 aaKnown RBP10.56□□□□□ -0.72
MINDY3-206ENST00000477891 STK39Q9UEW8 545 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 PCDHB7Q9Y5E2 793 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 THSD7BQ9C0I4 1608 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 CCDC162PA2VCL2 907 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 MOXD2PA6NHM9 499 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 PPP6CO00743 305 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 ENO3P13929 434 aaPredicted RBP10.56□□□□□ -0.72
MINDY3-206ENST00000477891 RAG1P15918 1043 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 XRCC1P18887 633 aaPredicted RBP10.56□□□□□ -0.72
MINDY3-206ENST00000477891 HDCP19113 662 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 PEX2P28328 305 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 RING1Q06587 406 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 CEACAM7Q14002 265 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 ZNF423Q2M1K9 1284 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 SFT2D3Q587I9 215 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 PIGGQ5H8A4 983 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 LRRC8DQ7L1W4 858 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 CUZD1Q86UP6 607 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 PELI3Q8N2H9 469 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 SLC43A3Q8NBI5 491 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 OR7D4Q8NG98 312 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 CEP70Q8NHQ1 597 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 BCL7CQ8WUZ0 217 aaPredicted RBP10.56□□□□□ -0.72
MINDY3-206ENST00000477891 SMIM14Q96QK8 99 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 EBF3Q9H4W6 596 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.56□□□□□ -0.72
MINDY3-206ENST00000477891 SRRDQ9UH36 339 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 SUFUQ9UMX1 484 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 GREB1Q4ZG55 1949 aa10.56□□□□□ -0.72
MINDY3-206ENST00000477891 CCDC189A1A4V9 331 aa10.55□□□□□ -0.72
MINDY3-206ENST00000477891 TRPC5OSA6NMA1 111 aa10.55□□□□□ -0.72
MINDY3-206ENST00000477891 MAP3K13O43283 966 aa10.55□□□□□ -0.72
MINDY3-206ENST00000477891 GJB5O95377 273 aa10.55□□□□□ -0.72
MINDY3-206ENST00000477891 MT-CO1P00395 513 aa10.55□□□□□ -0.72
MINDY3-206ENST00000477891 RBP1P09455 135 aa10.55□□□□□ -0.72
MINDY3-206ENST00000477891 RPL17P18621 184 aaKnown RBP10.55□□□□□ -0.72
MINDY3-206ENST00000477891 HOXD9P28356 352 aaPredicted RBP10.55□□□□□ -0.72
MINDY3-206ENST00000477891 RGRP47804 291 aa10.55□□□□□ -0.72
MINDY3-206ENST00000477891 KPNA2P52292 529 aaKnown RBP10.55□□□□□ -0.72
MINDY3-206ENST00000477891 ATXN3P54252 364 aaPredicted RBP10.55□□□□□ -0.72
MINDY3-206ENST00000477891 CDH13P55290 713 aa10.55□□□□□ -0.72
MINDY3-206ENST00000477891 YBEYP58557 167 aaPredicted RBP10.55□□□□□ -0.72
MINDY3-206ENST00000477891 RPS24P62847 133 aaKnown RBP10.55□□□□□ -0.72
MINDY3-206ENST00000477891 ACVR1Q04771 509 aa10.55□□□□□ -0.72
MINDY3-206ENST00000477891 ZRSR2Q15696 482 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms