RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 PLA2G15Q8NCC3 412 aa17.76■□□□□ 0.43
PTPN7-209ENST00000477554 CXorf40AQ8TE69 158 aa17.76■□□□□ 0.43
PTPN7-209ENST00000477554 MAML1Q92585 1016 aa17.76■□□□□ 0.43
PTPN7-209ENST00000477554 NUDCD1Q96RS6 583 aa17.76■□□□□ 0.43
PTPN7-209ENST00000477554 HERPUD2Q9BSE4 406 aa17.76■□□□□ 0.43
PTPN7-209ENST00000477554 SCNM1Q9BWG6 230 aa17.76■□□□□ 0.43
PTPN7-209ENST00000477554 TPX2Q9ULW0 747 aaKnown RBP17.76■□□□□ 0.43
PTPN7-209ENST00000477554 ATP8A1Q9Y2Q0 1164 aa17.76■□□□□ 0.43
PTPN7-209ENST00000477554 HEY1Q9Y5J3 304 aa17.76■□□□□ 0.43
PTPN7-209ENST00000477554 PTPRBP23467 1997 aa17.76■□□□□ 0.43
PTPN7-209ENST00000477554 PLXNB3Q9ULL4 1909 aa17.75■□□□□ 0.43
PTPN7-209ENST00000477554 CCDC66A2RUB6 948 aa17.75■□□□□ 0.43
PTPN7-209ENST00000477554 KCNK1O00180 336 aa17.75■□□□□ 0.43
PTPN7-209ENST00000477554 TRIM38O00635 465 aa17.75■□□□□ 0.43
PTPN7-209ENST00000477554 SCAMP1O15126 338 aa17.75■□□□□ 0.43
PTPN7-209ENST00000477554 HTRA2O43464 458 aaPredicted RBP17.75■□□□□ 0.43
PTPN7-209ENST00000477554 SERPINA4P29622 427 aa17.75■□□□□ 0.43
PTPN7-209ENST00000477554 CASQ1P31415 396 aa17.75■□□□□ 0.43
PTPN7-209ENST00000477554 NUDT1P36639 197 aa17.75■□□□□ 0.43
PTPN7-209ENST00000477554 RXRGP48443 463 aa17.75■□□□□ 0.43
PTPN7-209ENST00000477554 PFN3P60673 137 aa17.75■□□□□ 0.43
PTPN7-209ENST00000477554 SGCGQ13326 291 aa17.75■□□□□ 0.43
PTPN7-209ENST00000477554 CCDC157Q569K6 752 aa17.75■□□□□ 0.43
PTPN7-209ENST00000477554 SLC45A4Q5BKX6 768 aa17.75■□□□□ 0.43
PTPN7-209ENST00000477554 MARC1Q5VT66 337 aa17.75■□□□□ 0.43
PTPN7-209ENST00000477554 SLC9A4Q6AI14 798 aa17.75■□□□□ 0.43
PTPN7-209ENST00000477554 KYAT3Q6YP21 454 aaKnown RBP17.75■□□□□ 0.43
PTPN7-209ENST00000477554 RFLNAQ6ZTI6 216 aa17.75■□□□□ 0.43
PTPN7-209ENST00000477554 RHOT1Q8IXI2 618 aa17.75■□□□□ 0.43
PTPN7-209ENST00000477554 UBL4BQ8N7F7 174 aa17.75■□□□□ 0.43
PTPN7-209ENST00000477554 PDCD6IPQ8WUM4 868 aaKnown RBP17.75■□□□□ 0.43
PTPN7-209ENST00000477554 LENG8Q96PV6 779 aaPredicted RBP17.75■□□□□ 0.43
PTPN7-209ENST00000477554 WDR24Q96S15 920 aa17.75■□□□□ 0.43
PTPN7-209ENST00000477554 NAPGQ99747 312 aaPredicted RBP17.75■□□□□ 0.43
PTPN7-209ENST00000477554 ERVMER34-1Q9H9K5 563 aa17.75■□□□□ 0.43
PTPN7-209ENST00000477554 SCUBE2Q9NQ36 999 aa17.75■□□□□ 0.43
PTPN7-209ENST00000477554 B4GALT6Q9UBX8 382 aa17.75■□□□□ 0.43
PTPN7-209ENST00000477554 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.75■□□□□ 0.43
PTPN7-209ENST00000477554 PCDHB9Q9Y5E1 797 aa17.75■□□□□ 0.43
PTPN7-209ENST00000477554 HS3ST3A1Q9Y663 406 aa17.75■□□□□ 0.43
PTPN7-209ENST00000477554 CTAGE9A4FU28 777 aa17.74■□□□□ 0.43
PTPN7-209ENST00000477554 A6NNZ2 444 aa17.74■□□□□ 0.43
PTPN7-209ENST00000477554 PSTPIP1O43586 416 aa17.74■□□□□ 0.43
PTPN7-209ENST00000477554 NEBLO76041 1014 aa17.74■□□□□ 0.43
PTPN7-209ENST00000477554 TM7SF2O76062 418 aa17.74■□□□□ 0.43
PTPN7-209ENST00000477554 ITGAVP06756 1048 aa17.74■□□□□ 0.43
PTPN7-209ENST00000477554 PECAM1P16284 738 aaPredicted RBP17.74■□□□□ 0.43
PTPN7-209ENST00000477554 CTPS1P17812 591 aa17.74■□□□□ 0.43
PTPN7-209ENST00000477554 LHCGRP22888 699 aa17.74■□□□□ 0.43
PTPN7-209ENST00000477554 XPAP23025 273 aaPredicted RBP17.74■□□□□ 0.43
PTPN7-209ENST00000477554 AP1S1P61966 158 aa17.74■□□□□ 0.43
PTPN7-209ENST00000477554 EIF2B5Q13144 721 aaKnown RBP17.74■□□□□ 0.43
PTPN7-209ENST00000477554 PDE1CQ14123 709 aaPredicted RBP17.74■□□□□ 0.43
PTPN7-209ENST00000477554 RPS6KA1Q15418 735 aa17.74■□□□□ 0.43
PTPN7-209ENST00000477554 TCEA2Q15560 299 aa17.74■□□□□ 0.43
PTPN7-209ENST00000477554 LRRC38Q5VT99 294 aa17.74■□□□□ 0.43
PTPN7-209ENST00000477554 BRAT1Q6PJG6 821 aa17.74■□□□□ 0.43
PTPN7-209ENST00000477554 SYT10Q6XYQ8 523 aa17.74■□□□□ 0.43
PTPN7-209ENST00000477554 LIPIQ6XZB0 460 aa17.74■□□□□ 0.43
PTPN7-209ENST00000477554 TSPAN33Q86UF1 283 aa17.74■□□□□ 0.43
PTPN7-209ENST00000477554 RBFAQ8N0V3 343 aa17.74■□□□□ 0.43
PTPN7-209ENST00000477554 CNTD1Q8N815 330 aa17.74■□□□□ 0.43
PTPN7-209ENST00000477554 ARRDC2Q8TBH0 407 aa17.74■□□□□ 0.43
PTPN7-209ENST00000477554 SEMA3CQ99985 751 aa17.74■□□□□ 0.43
PTPN7-209ENST00000477554 TTLL3Q9Y4R7 772 aa17.74■□□□□ 0.43
PTPN7-209ENST00000477554 LRP4O75096 1905 aa17.74■□□□□ 0.43
PTPN7-209ENST00000477554 MATN3O15232 486 aa17.73■□□□□ 0.43
PTPN7-209ENST00000477554 FFAR2O15552 330 aa17.73■□□□□ 0.43
PTPN7-209ENST00000477554 ALPIP09923 528 aa17.73■□□□□ 0.43
PTPN7-209ENST00000477554 DGKAP23743 735 aa17.73■□□□□ 0.43
PTPN7-209ENST00000477554 CTNNA2P26232 953 aa17.73■□□□□ 0.43
PTPN7-209ENST00000477554 CTNNA1P35221 906 aaKnown RBP17.73■□□□□ 0.43
PTPN7-209ENST00000477554 CDKN2BP42772 138 aa17.73■□□□□ 0.43
PTPN7-209ENST00000477554 GRK6P43250 576 aa17.73■□□□□ 0.43
PTPN7-209ENST00000477554 CFAP58Q5T655 872 aa17.73■□□□□ 0.43
PTPN7-209ENST00000477554 GLRX5Q86SX6 157 aa17.73■□□□□ 0.43
PTPN7-209ENST00000477554 RFX6Q8HWS3 928 aa17.73■□□□□ 0.43
PTPN7-209ENST00000477554 MAP7D3Q8IWC1 876 aa17.73■□□□□ 0.43
PTPN7-209ENST00000477554 HCAR2Q8TDS4 363 aa17.73■□□□□ 0.43
PTPN7-209ENST00000477554 SKA1Q96BD8 255 aa17.73■□□□□ 0.43
PTPN7-209ENST00000477554 HES6Q96HZ4 224 aa17.73■□□□□ 0.43
PTPN7-209ENST00000477554 BRD8Q9H0E9 1235 aa17.73■□□□□ 0.43
PTPN7-209ENST00000477554 RBM22Q9NW64 420 aaKnown RBP eCLIP17.73■□□□□ 0.43
PTPN7-209ENST00000477554 DNAJC28Q9NX36 388 aa17.73■□□□□ 0.43
PTPN7-209ENST00000477554 ANGPTL2Q9UKU9 493 aa17.73■□□□□ 0.43
PTPN7-209ENST00000477554 OR1A2Q9Y585 309 aa17.73■□□□□ 0.43
PTPN7-209ENST00000477554 PCDHA3Q9Y5H8 950 aa17.73■□□□□ 0.43
PTPN7-209ENST00000477554 COL5A1P20908 1838 aaPredicted RBP17.73■□□□□ 0.43
PTPN7-209ENST00000477554 SPTY2D1-AS1A0A0U1RR47 76 aa17.72■□□□□ 0.43
PTPN7-209ENST00000477554 NPIPB15A6NHN6 443 aaPredicted RBP17.72■□□□□ 0.43
PTPN7-209ENST00000477554 K7ESM1 405 aa17.72■□□□□ 0.43
PTPN7-209ENST00000477554 FPGTO14772 594 aa17.72■□□□□ 0.43
PTPN7-209ENST00000477554 PIAS2O75928 621 aa17.72■□□□□ 0.43
PTPN7-209ENST00000477554 PRLP01236 227 aa17.72■□□□□ 0.43
PTPN7-209ENST00000477554 JCHAINP01591 159 aa17.72■□□□□ 0.43
PTPN7-209ENST00000477554 PCCBP05166 539 aa17.72■□□□□ 0.43
PTPN7-209ENST00000477554 CELA2BP08218 269 aaPredicted RBP17.72■□□□□ 0.43
PTPN7-209ENST00000477554 MMP2P08253 660 aa17.72■□□□□ 0.43
PTPN7-209ENST00000477554 CCNB1P14635 433 aa17.72■□□□□ 0.43
PTPN7-209ENST00000477554 ARRB1P49407 418 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms