RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 KCNH6Q9H252 994 aa15.95■□□□□ 0.14
COPS3-207ENST00000477299 SMOC1Q9H4F8 434 aa15.95■□□□□ 0.14
COPS3-207ENST00000477299 FZD3Q9NPG1 666 aa15.95■□□□□ 0.14
COPS3-207ENST00000477299 HOMER3Q9NSC5 361 aa15.95■□□□□ 0.14
COPS3-207ENST00000477299 PIH1D1Q9NWS0 290 aaKnown RBP15.95■□□□□ 0.14
COPS3-207ENST00000477299 CDC23Q9UJX2 597 aa15.95■□□□□ 0.14
COPS3-207ENST00000477299 PHTF1Q9UMS5 762 aa15.95■□□□□ 0.14
COPS3-207ENST00000477299 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.95■□□□□ 0.14
COPS3-207ENST00000477299 PPIL1Q9Y3C6 166 aa15.95■□□□□ 0.14
COPS3-207ENST00000477299 TCRBV7S3A2A0A539 114 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 ANKRD66B4E2M5 251 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 NEMP1O14524 444 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 SLC31A1O15431 190 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 AP1G1O43747 822 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 GRIA1P42261 906 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 PAFAH1B1P43034 410 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 LIG3P49916 1009 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 MPP3Q13368 585 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 CDKN3Q16667 212 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 ZNF284Q2VY69 593 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 TMEM259Q4ZIN3 620 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 DENND2CQ68D51 928 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 DENND5AQ6IQ26 1287 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 ZC3H14Q6PJT7 736 aaKnown RBP15.94■□□□□ 0.14
COPS3-207ENST00000477299 CRTC1Q6UUV9 634 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 LIPIQ6XZB0 460 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 MICALCLQ6ZW33 695 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 DPPA4Q7L190 304 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 HORMAD1Q86X24 394 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 KLHDC8BQ8IXV7 354 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 CCDC89Q8N998 374 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 SPOCK2Q92563 424 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 RAB7BQ96AH8 199 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 EID2BQ96D98 161 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 RMDN1Q96DB5 314 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 IFT43Q96FT9 208 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 SCRN2Q96FV2 425 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 FEM1CQ96JP0 617 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 MCCC1Q96RQ3 725 aaPredicted RBP15.94■□□□□ 0.14
COPS3-207ENST00000477299 FERMT1Q9BQL6 677 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 RAB6BQ9NRW1 208 aa15.94■□□□□ 0.14
COPS3-207ENST00000477299 SMG5Q9UPR3 1016 aaKnown RBP15.94■□□□□ 0.14
COPS3-207ENST00000477299 TDRD6O60522 2096 aaKnown RBP15.94■□□□□ 0.14
COPS3-207ENST00000477299 AURKAO14965 403 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 RAD51BO15315 384 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 TSPAN6O43657 245 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 CLDN7O95471 211 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 NDST3O95803 873 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 PAK4O96013 591 aaPredicted RBP15.93■□□□□ 0.14
COPS3-207ENST00000477299 EPHB1P54762 984 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 GEMP55040 296 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 POLR2LP62875 67 aaKnown RBP15.93■□□□□ 0.14
COPS3-207ENST00000477299 MSLNQ13421 630 aaPredicted RBP15.93■□□□□ 0.14
COPS3-207ENST00000477299 SLC14A2Q15849 920 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 CNGA3Q16281 694 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 LAYNQ6UX15 382 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 RANBP10Q6VN20 620 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 HSD11B1LQ7Z5J1 315 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 PELI3Q8N2H9 469 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 DCLK2Q8N568 766 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 SPATA4Q8NEY3 305 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 CADM4Q8NFZ8 388 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 C1orf216Q8TAB5 229 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 KRT12Q99456 494 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 MIR1-1HGQ9H1L0 117 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 ARRDC1-AS1Q9H2J1 176 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 CAAP1Q9H8G2 361 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 PREBQ9HCU5 417 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 VPS45Q9NRW7 570 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 HAUS2Q9NVX0 235 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 SHOC2Q9UQ13 582 aa15.93■□□□□ 0.14
COPS3-207ENST00000477299 GOLGA6L10A0A0M3HER8 536 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 MEI4A8MW99 385 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 PATE3B3GLJ2 98 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 LATO43561 262 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 ANXA9O76027 345 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 RHOBTB1O94844 696 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 C1SP09871 688 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 C6P13671 934 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 TPH1P17752 444 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 VIPR1P32241 457 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 CCR5P51681 352 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 CREB5Q02930 508 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 PTSQ03393 145 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 GPS1Q13098 491 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 PRPSAP1Q14558 356 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 PTPRCAPQ14761 206 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 ELF2Q15723 593 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 SLC1A5Q15758 541 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 LRRC66Q68CR7 880 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 ERAP2Q6P179 960 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 LYSMD3Q7Z3D4 306 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 TRIM69Q86WT6 500 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 RGL4Q8IZJ4 473 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 CBARPQ8N350 705 aaPredicted RBP15.92■□□□□ 0.14
COPS3-207ENST00000477299 PIGKQ92643 395 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 FUBP1Q96AE4 644 aaKnown RBP15.92■□□□□ 0.14
COPS3-207ENST00000477299 TBL1YQ9BQ87 522 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 TRIM51Q9BSJ1 452 aa15.92■□□□□ 0.14
COPS3-207ENST00000477299 C1QTNF2Q9BXJ5 285 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms