RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 COL28A1Q2UY09 1125 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 TSSK4Q6SA08 328 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 SLC35F3Q8IY50 421 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 PSPC1Q8WXF1 523 aaKnown RBP5.09□□□□□ -1.59
PTCD3-211ENST00000476215 PERPQ96FX8 193 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 TKTL2Q9H0I9 626 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 KIF9Q9HAQ2 790 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 DDX4Q9NQI0 724 aaKnown RBP5.09□□□□□ -1.59
PTCD3-211ENST00000476215 ASAH2Q9NR71 780 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 OR6C3Q9NZP0 311 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 MYO6Q9UM54 1294 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 PAM16Q9Y3D7 125 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 NFE2L3Q9Y4A8 694 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 KCNE2Q9Y6J6 123 aa5.09□□□□□ -1.59
PTCD3-211ENST00000476215 CKAP5Q14008 2032 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 UTYO14607 1347 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 A0A1B0GVM2 712 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 TIMM23O14925 209 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 MMP2P08253 660 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 HOXB5P09067 269 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 KRT10P13645 584 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 CHATP28329 748 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 HOXA11P31270 313 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-211ENST00000476215 ARRB2P32121 409 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 ARL3P36405 182 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 RPL3P39023 403 aaKnown RBP5.08□□□□□ -1.6
PTCD3-211ENST00000476215 PIP4K2AP48426 406 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-211ENST00000476215 SORDQ00796 357 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 SETQ01105 290 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-211ENST00000476215 GOLGA8DPQ0D2H9 430 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 FHL1Q13642 323 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 DPCR1Q3MIW9 517 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 SGO1Q5FBB7 561 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 GPATCH4Q5T3I0 446 aaKnown RBP5.08□□□□□ -1.6
PTCD3-211ENST00000476215 TYW3Q6IPR3 259 aaKnown RBP5.08□□□□□ -1.6
PTCD3-211ENST00000476215 C4orf50Q6ZRC1 276 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 SHFQ7M4L6 423 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 PXKQ7Z7A4 578 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 ZDHHC17Q8IUH5 632 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 ZBTB2Q8N680 514 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 PDILTQ8N807 584 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 SCCPDHQ8NBX0 429 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 TMEM116Q8NCL8 245 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 BEST2Q8NFU1 509 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 HUS1BQ8NHY5 278 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 FAM149B1Q96BN6 582 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 CAMK1GQ96NX5 476 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 SCPEP1Q9HB40 452 aa5.08□□□□□ -1.6
PTCD3-211ENST00000476215 IGHV4-28A0A0C4DH34 117 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 FAM237BA0A1B0GVD1 139 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 PI4KAP2A4QPH2 592 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 J3KR12 359 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 PAGE4O60829 102 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 RNASEH2AO75792 299 aaKnown RBP5.07□□□□□ -1.6
PTCD3-211ENST00000476215 VNN2O95498 520 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 DDX58O95786 925 aaKnown RBP5.07□□□□□ -1.6
PTCD3-211ENST00000476215 CD58P19256 250 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 PCYT1AP49585 367 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 Q0VFX4 171 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 NEDD9Q14511 834 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 DRAP1Q14919 205 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-211ENST00000476215 MED22Q15528 200 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 MMEL1Q495T6 779 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 SNX30Q5VWJ9 437 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 CRELD2Q6UXH1 353 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-211ENST00000476215 C9orf47Q6ZRZ4 202 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 LINGO2Q7L985 606 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 ADSSL1Q8N142 457 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 NGEFQ8N5V2 710 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 AADATQ8N5Z0 425 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 FRMD1Q8N878 549 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 OR14A16Q8NHC5 309 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 ADAMTS14Q8WXS8 1223 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 TXNDC15Q96J42 360 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 MAP7D2Q96T17 732 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 STRA6Q9BX79 667 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 EBF3Q9H4W6 596 aa5.07□□□□□ -1.6
PTCD3-211ENST00000476215 FBRSL1Q9HCM7 1045 aaKnown RBP5.07□□□□□ -1.6
PTCD3-211ENST00000476215 HNRNPCL1O60812 293 aaKnown RBP5.06□□□□□ -1.6
PTCD3-211ENST00000476215 SCGB1D1O95968 90 aa5.06□□□□□ -1.6
PTCD3-211ENST00000476215 IL7RP16871 459 aa5.06□□□□□ -1.6
PTCD3-211ENST00000476215 HOXB6P17509 224 aaKnown RBP5.06□□□□□ -1.6
PTCD3-211ENST00000476215 MLH1P40692 756 aa5.06□□□□□ -1.6
PTCD3-211ENST00000476215 AMTP48728 403 aa5.06□□□□□ -1.6
PTCD3-211ENST00000476215 CEBPZQ03701 1054 aaKnown RBP5.06□□□□□ -1.6
PTCD3-211ENST00000476215 MAMLD1Q13495 774 aa5.06□□□□□ -1.6
PTCD3-211ENST00000476215 NAE1Q13564 534 aa5.06□□□□□ -1.6
PTCD3-211ENST00000476215 SHBQ15464 509 aa5.06□□□□□ -1.6
PTCD3-211ENST00000476215 HYIQ5T013 277 aa5.06□□□□□ -1.6
PTCD3-211ENST00000476215 HIST2H2BCQ6DN03 193 aa5.06□□□□□ -1.6
PTCD3-211ENST00000476215 HIST2H2BDQ6DRA6 164 aa5.06□□□□□ -1.6
PTCD3-211ENST00000476215 KLHL24Q6TFL4 600 aa5.06□□□□□ -1.6
PTCD3-211ENST00000476215 CYP20A1Q6UW02 462 aa5.06□□□□□ -1.6
PTCD3-211ENST00000476215 QSOX2Q6ZRP7 698 aa5.06□□□□□ -1.6
PTCD3-211ENST00000476215 HAPLN4Q86UW8 402 aa5.06□□□□□ -1.6
PTCD3-211ENST00000476215 AGBL3Q8NEM8 1001 aa5.06□□□□□ -1.6
PTCD3-211ENST00000476215 NEK9Q8TD19 979 aa5.06□□□□□ -1.6
PTCD3-211ENST00000476215 MMABQ96EY8 250 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-211ENST00000476215 SLITRK1Q96PX8 696 aa5.06□□□□□ -1.6
PTCD3-211ENST00000476215 CHCHD6Q9BRQ6 235 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms