RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 ZNF641Q96N77 438 aaPredicted RBP17.82■□□□□ 0.44
CCM2-207ENST00000475551 PSD2Q9BQI7 771 aa17.82■□□□□ 0.44
CCM2-207ENST00000475551 TNFRSF12AQ9NP84 129 aa17.82■□□□□ 0.44
CCM2-207ENST00000475551 GIT1Q9Y2X7 761 aa17.82■□□□□ 0.44
CCM2-207ENST00000475551 TSC22D4Q9Y3Q8 395 aa17.82■□□□□ 0.44
CCM2-207ENST00000475551 A0A087X1B8 175 aa17.82■□□□□ 0.44
CCM2-207ENST00000475551 CCDC78A2IDD5 438 aa17.82■□□□□ 0.44
CCM2-207ENST00000475551 AP3B1O00203 1094 aa17.82■□□□□ 0.44
CCM2-207ENST00000475551 GJB1P08034 283 aa17.82■□□□□ 0.44
CCM2-207ENST00000475551 IQCF3P0C7M6 154 aa17.82■□□□□ 0.44
CCM2-207ENST00000475551 LCP1P13796 627 aa17.82■□□□□ 0.44
CCM2-207ENST00000475551 CD68P34810 354 aaPredicted RBP17.82■□□□□ 0.44
CCM2-207ENST00000475551 MATKP42679 507 aa17.82■□□□□ 0.44
CCM2-207ENST00000475551 RPS9P46781 194 aaKnown RBP17.82■□□□□ 0.44
CCM2-207ENST00000475551 ADARB1P78563 741 aaKnown RBP17.82■□□□□ 0.44
CCM2-207ENST00000475551 GALNT1Q10472 559 aaPredicted RBP17.82■□□□□ 0.44
CCM2-207ENST00000475551 SLC25A52Q3SY17 297 aa17.82■□□□□ 0.44
CCM2-207ENST00000475551 RETREG3Q86VR2 466 aa17.82■□□□□ 0.44
CCM2-207ENST00000475551 DDIASQ8IXT1 998 aa17.82■□□□□ 0.44
CCM2-207ENST00000475551 MINDY1Q8N5J2 469 aa17.82■□□□□ 0.44
CCM2-207ENST00000475551 CCDC126Q96EE4 140 aa17.82■□□□□ 0.44
CCM2-207ENST00000475551 GLT1D1Q96MS3 346 aa17.82■□□□□ 0.44
CCM2-207ENST00000475551 PRMT7Q9NVM4 692 aaPredicted RBP17.82■□□□□ 0.44
CCM2-207ENST00000475551 PPP2R3BQ9Y5P8 575 aa17.82■□□□□ 0.44
CCM2-207ENST00000475551 FAM95CA0A1B0GW59 222 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 TPST1O60507 370 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 TPH1P17752 444 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 DNAJB2P25686 324 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 IREB2P48200 963 aaKnown RBP17.81■□□□□ 0.44
CCM2-207ENST00000475551 SULT1E1P49888 294 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 MLLT10P55197 1068 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 BACE1P56817 501 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 CD300CQ08708 224 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 DEPDC1Q5TB30 811 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 LARP4Q71RC2 724 aaKnown RBP eCLIP17.81■□□□□ 0.449e-6■■■■■ 29.6
CCM2-207ENST00000475551 SPATA6LQ8N4H0 392 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 SNX31Q8N9S9 440 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 MINDY2Q8NBR6 621 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 SNX19Q92543 992 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 NRBF2Q96F24 287 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 ALPK1Q96QP1 1244 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 FANCEQ9HB96 536 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 SCHIP1Q9P0W5 487 aaPredicted RBP17.81■□□□□ 0.44
CCM2-207ENST00000475551 MAP10Q9P2G4 905 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 DAPK2Q9UIK4 370 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 NME7Q9Y5B8 376 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 RLFQ13129 1914 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 H0YAE9 185 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 YAP1P46937 504 aaKnown RBP17.81■□□□□ 0.44
CCM2-207ENST00000475551 STX1BP61266 288 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 BST2Q10589 180 aaKnown RBP17.81■□□□□ 0.44
CCM2-207ENST00000475551 CDH17Q12864 832 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 PRPSAP1Q14558 356 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 SPATS1Q496A3 300 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 PDZD4Q76G19 769 aaPredicted RBP17.81■□□□□ 0.44
CCM2-207ENST00000475551 CHST15Q7LFX5 561 aaPredicted RBP17.81■□□□□ 0.44
CCM2-207ENST00000475551 ZBTB46Q86UZ6 589 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 MFSD6LQ8IWD5 586 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 HEXDCQ8WVB3 486 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 APOL2Q9BQE5 337 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 TRHDEQ9UKU6 1024 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 NDUFAF1Q9Y375 327 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 LCTP09848 1927 aa17.81■□□□□ 0.44
CCM2-207ENST00000475551 GFAPP14136 432 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 GPX3P22352 226 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 OXTRP30559 389 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 NOS2P35228 1153 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 RFC2P35250 354 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 GJA9P57773 515 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 ZNF846Q147U1 533 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 SNX17Q15036 470 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 NT5DC4Q86YG4 428 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 SFRP1Q8N474 314 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.8■□□□□ 0.44
CCM2-207ENST00000475551 RAD21L1Q9H4I0 556 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 INTS10Q9NVR2 710 aaKnown RBP17.8■□□□□ 0.44
CCM2-207ENST00000475551 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.8■□□□□ 0.44
CCM2-207ENST00000475551 EGFL7Q9UHF1 273 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 NEMP2A6NFY4 417 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 EEF2KO00418 725 aaKnown RBP17.8■□□□□ 0.44
CCM2-207ENST00000475551 ACADSBP45954 432 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 TKTL1P51854 596 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 MAPK10P53779 464 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 CBX2Q14781 532 aaPredicted RBP17.8■□□□□ 0.44
CCM2-207ENST00000475551 BROXQ5VW32 411 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 GTF2IRD2BQ6EKJ0 949 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 GTF2IRD2Q86UP8 949 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 DEFB106AQ8N104 65 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 TMCO5AQ8N6Q1 288 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 LEMD2Q8NC56 503 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 STARD8Q92502 1023 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 EFHD2Q96C19 240 aaPredicted RBP17.8■□□□□ 0.44
CCM2-207ENST00000475551 LRCH3Q96II8 777 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 CPB2Q96IY4 423 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 NFKBIZQ9BYH8 718 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 TMPRSS4Q9NRS4 437 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 ZNF639Q9UID6 485 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 VWA7Q9Y334 891 aa17.8■□□□□ 0.44
CCM2-207ENST00000475551 CLDN25C9JDP6 229 aa17.79■□□□□ 0.44
CCM2-207ENST00000475551 NCAM2O15394 837 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms