RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 PPARGC1AQ9UBK2 798 aaKnown RBP5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 APEX2Q9UBZ4 518 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 TUBD1Q9UJT1 453 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 STAP1Q9ULZ2 295 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 NEU3Q9UQ49 428 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 COQ6Q9Y2Z9 468 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 OR1A2Q9Y585 309 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 DGKBQ9Y6T7 804 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 ZFC3H1O60293 1989 aaKnown RBP5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 CHD5Q8TDI0 1954 aa5.18□□□□□ -1.58
SNRNP40-204ENST00000474025 TMEM202A6NGA9 273 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 TMEM110-MUSTN1A8MSY1 372 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 NUDT21O43809 227 aaKnown RBP5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 TMCC1O94876 653 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 GNA14O95837 355 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 F9P00740 461 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 PNMA6AP0CW24 399 aaPredicted RBP5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 CCL4P13236 92 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 LIFP15018 202 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 TIMP2P16035 220 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 BMP6P22004 513 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 HTR1BP28222 390 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 KRT9P35527 623 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 FLT3P36888 993 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 SCNN1AP37088 669 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 ETFBP38117 255 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 USP8P40818 1118 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 GABRB2P47870 512 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 MAPKAPK2P49137 400 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 GEMIN4P57678 1058 aaKnown RBP5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 SNX16P57768 344 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 RNASE9P60153 205 aaKnown RBP5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 NRG1Q02297 640 aaPredicted RBP5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 PTK2Q05397 1052 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 INPP5AQ14642 412 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 POLD3Q15054 466 aaPredicted RBP5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 AGERQ15109 404 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 MAP9Q49MG5 647 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 TMEM52BQ4KMG9 183 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 C14orf28Q4W4Y0 310 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 EFHC2Q5JST6 749 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 FAM102AQ5T9C2 384 aaPredicted RBP5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 TMEM164Q5U3C3 297 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 ISM2Q6H9L7 571 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 TRNP1Q6NT89 227 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 OGFOD3Q6PK18 319 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 ENPP7Q6UWV6 458 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 LEKR1Q6ZMV7 388 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 RD3Q7Z3Z2 195 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 ZNF438Q7Z4V0 828 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 SLC47A2Q86VL8 602 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 FAM131BQ86XD5 332 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 XYLT1Q86Y38 959 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 FAM46DQ8NEK8 389 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 NELFBQ8WX92 580 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 OR1E3Q8WZA6 343 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 NKD1Q969G9 470 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 FAM81BQ96LP2 452 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 WDR92Q96MX6 357 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 GDAP1L1Q96MZ0 367 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 APOOQ9BUR5 198 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 TTYH3Q9C0H2 523 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 SEMA6CQ9H3T2 930 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 SYNCQ9H7C4 482 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 RDH14Q9HBH5 336 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 FGF22Q9HCT0 170 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 PLCB1Q9NQ66 1216 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 TMEM51Q9NW97 253 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 TMEM248Q9NWD8 314 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 LRIT1Q9P2V4 623 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 DKK3Q9UBP4 350 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 KLQ9UEF7 1012 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 ANAPC2Q9UJX6 822 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 AJAP1Q9UKB5 411 aaPredicted RBP5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 MAN1B1Q9UKM7 699 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 CTNND2Q9UQB3 1225 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 MFHAS1Q9Y4C4 1052 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 PCDHGA3Q9Y5H0 932 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 DCHS2Q6V1P9 2916 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 PDZD2O15018 2839 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 APCP25054 2843 aa5.17□□□□□ -1.58
SNRNP40-204ENST00000474025 ARHGEF17Q96PE2 2063 aaPredicted RBP5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 IGHV5-10-1A0A0J9YXX1 117 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 BICDL2A1A5D9 508 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 TSPAN11A1L157 253 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 ZSCAN5CA6NGD5 496 aaPredicted RBP5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 B4DGG1 531 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 FAM72CH0Y354 149 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 HGSO14964 777 aaPredicted RBP5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 INSIG1O15503 277 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 B4GAT1O43505 415 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 RAMP2O60895 175 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 WFS1O76024 890 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 PIGNO95427 931 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 CPNE6O95741 557 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 IGSF6O95976 241 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 TNFP01375 233 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 PCCBP05166 539 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms