RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 TCF12Q99081 682 aa10.16□□□□□ -0.78
APTX-216ENST00000472896 KLHL25Q9H0H3 589 aa10.16□□□□□ -0.78
APTX-216ENST00000472896 ZBP1Q9H171 429 aa10.16□□□□□ -0.78
APTX-216ENST00000472896 RMND5AQ9H871 391 aa10.16□□□□□ -0.78
APTX-216ENST00000472896 HMG20AQ9NP66 347 aa10.16□□□□□ -0.78
APTX-216ENST00000472896 SMYD2Q9NRG4 433 aa10.16□□□□□ -0.78
APTX-216ENST00000472896 TBC1D22BQ9NU19 505 aa10.16□□□□□ -0.78
APTX-216ENST00000472896 DLL3Q9NYJ7 618 aa10.16□□□□□ -0.78
APTX-216ENST00000472896 COPG2Q9UBF2 871 aa10.16□□□□□ -0.78
APTX-216ENST00000472896 MID2Q9UJV3 735 aa10.16□□□□□ -0.78
APTX-216ENST00000472896 FBXL21Q9UKT6 434 aa10.16□□□□□ -0.78
APTX-216ENST00000472896 DUSP12Q9UNI6 340 aa10.16□□□□□ -0.78
APTX-216ENST00000472896 PCDHB4Q9Y5E5 795 aa10.16□□□□□ -0.78
APTX-216ENST00000472896 SPO11Q9Y5K1 396 aa10.16□□□□□ -0.78
APTX-216ENST00000472896 NCOR2Q9Y618 2525 aa10.16□□□□□ -0.78
APTX-216ENST00000472896 TCRBV3S1A0A5B6 114 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 HMX2A2RU54 273 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 ANKRD34BA5PLL1 514 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 KPNA7A9QM74 516 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 F8VP50 259 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 J3QRK9 145 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 DDX39AO00148 427 aaKnown RBP10.15□□□□□ -0.78
APTX-216ENST00000472896 KMOO15229 486 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 CHMP2AO43633 222 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 C22orf31O95567 290 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 CPNE6O95741 557 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 HSPA4LO95757 839 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 NTRK1P04629 796 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 ACO1P21399 889 aaKnown RBP10.15□□□□□ -0.78
APTX-216ENST00000472896 PRKAA2P54646 552 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 RPL7AP62424 266 aaKnown RBP10.15□□□□□ -0.78
APTX-216ENST00000472896 OCA2Q04671 838 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 TRAF2Q12933 501 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 NOMO1Q15155 1222 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 SMUG1Q53HV7 270 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 ZNF484Q5JVG2 852 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 MROH9Q5TGP6 573 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 TTC23LQ6PF05 361 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 DARS2Q6PI48 645 aaKnown RBP10.15□□□□□ -0.78
APTX-216ENST00000472896 B3GNT9Q6UX72 402 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 UNC5AQ6ZN44 842 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 TMEM26Q6ZUK4 368 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 GPR149Q86SP6 731 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 RFX6Q8HWS3 928 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 MAP4K3Q8IVH8 894 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 C10orf107Q8IVU9 208 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 CCDC60Q8IWA6 550 aaPredicted RBP10.15□□□□□ -0.78
APTX-216ENST00000472896 SNX31Q8N9S9 440 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 FNIP1Q8TF40 1166 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 LRTOMTQ8WZ04 291 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 HPS1Q92902 700 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 ATP6V1E2Q96A05 226 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 FBXL8Q96CD0 374 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 RCN3Q96D15 328 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 NRBF2Q96F24 287 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 MAGED4Q96JG8 741 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 MCEEQ96PE7 176 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 EBNA1BP2Q99848 306 aaKnown RBP10.15□□□□□ -0.78
APTX-216ENST00000472896 SH3GL1Q99961 368 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 LXNQ9BS40 222 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 OSBPL10Q9BXB5 764 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 ZNF385DQ9H6B1 395 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 DZANK1Q9NVP4 752 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 CORINQ9Y5Q5 1042 aa10.15□□□□□ -0.78
APTX-216ENST00000472896 C1orf232A0A0U1RR37 186 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 M0QX08 132 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 STK25O00506 426 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 CFLARO15519 480 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 HOXA2O43364 376 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 FOXD2O60548 495 aaPredicted RBP10.14□□□□□ -0.79
APTX-216ENST00000472896 KLHL41O60662 606 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 AVILO75366 819 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 VAPBO95292 243 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 KRT75O95678 551 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 CALCAP01258 141 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 CFHP08603 1231 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 ENO3P13929 434 aaPredicted RBP10.14□□□□□ -0.79
APTX-216ENST00000472896 CD247P20963 164 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 GARTP22102 1010 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 SERPINB5P36952 375 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 DYNLT1P63172 113 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 CLDN10P78369 228 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 SLC25A11Q02978 314 aaKnown RBP10.14□□□□□ -0.79
APTX-216ENST00000472896 CUL2Q13617 745 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 C6orf183Q5T699 404 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 VWA5B1Q5TIE3 1220 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 SWSAP1Q6NVH7 229 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 GALNT18Q6P9A2 607 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 ABRAXAS1Q6UWZ7 409 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 AGMOQ6ZNB7 445 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 OTOP3Q7RTS5 596 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 TRMT1LQ7Z2T5 733 aaKnown RBP10.14□□□□□ -0.79
APTX-216ENST00000472896 ABI1Q8IZP0 508 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 CADM3Q8N126 398 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 GPD1LQ8N335 351 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 SDR16C5Q8N3Y7 309 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 TMCO5AQ8N6Q1 288 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 GOLM1Q8NBJ4 401 aa10.14□□□□□ -0.79
APTX-216ENST00000472896 LSM14AQ8ND56 463 aaKnown RBP10.14□□□□□ -0.79
APTX-216ENST00000472896 ZSWIM2Q8NEG5 633 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms