RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 SMTNL1A8MU46 457 aa19.87■□□□□ 0.77
COL9A3-210ENST00000472880 KLK10O43240 276 aa19.87■□□□□ 0.77
COL9A3-210ENST00000472880 FTLP02792 175 aaPredicted RBP19.87■□□□□ 0.77
COL9A3-210ENST00000472880 PRB1P04280 392 aa19.87■□□□□ 0.77
COL9A3-210ENST00000472880 ELFN1P0C7U0 828 aa19.87■□□□□ 0.77
COL9A3-210ENST00000472880 GZMAP12544 262 aa19.87■□□□□ 0.77
COL9A3-210ENST00000472880 C19orf57Q0VDD7 668 aa19.87■□□□□ 0.77
COL9A3-210ENST00000472880 ARHGAP36Q6ZRI8 547 aa19.87■□□□□ 0.77
COL9A3-210ENST00000472880 ZNF571Q7Z3V5 609 aaPredicted RBP19.87■□□□□ 0.77
COL9A3-210ENST00000472880 LSM14AQ8ND56 463 aaKnown RBP19.87■□□□□ 0.77
COL9A3-210ENST00000472880 WDR36Q8NI36 951 aaKnown RBP19.87■□□□□ 0.77
COL9A3-210ENST00000472880 CCDC74AQ96AQ1 378 aa19.87■□□□□ 0.77
COL9A3-210ENST00000472880 ECHDC3Q96DC8 303 aa19.87■□□□□ 0.77
COL9A3-210ENST00000472880 TRIM11Q96F44 468 aa19.87■□□□□ 0.77
COL9A3-210ENST00000472880 PDXPQ96GD0 296 aa19.87■□□□□ 0.77
COL9A3-210ENST00000472880 BPIFA3Q9BQP9 254 aa19.87■□□□□ 0.77
COL9A3-210ENST00000472880 ZWILCHQ9H900 591 aa19.87■□□□□ 0.77
COL9A3-210ENST00000472880 ASXL3Q9C0F0 2248 aa19.86■□□□□ 0.77
COL9A3-210ENST00000472880 A0A1W2PNU3 283 aaPredicted RBP19.86■□□□□ 0.77
COL9A3-210ENST00000472880 CACNB4O00305 520 aaPredicted RBP19.86■□□□□ 0.77
COL9A3-210ENST00000472880 LRCH4O75427 683 aa19.86■□□□□ 0.77
COL9A3-210ENST00000472880 RECQL5O94762 991 aaPredicted RBP19.86■□□□□ 0.77
COL9A3-210ENST00000472880 TNFP01375 233 aa19.86■□□□□ 0.77
COL9A3-210ENST00000472880 RENBPP51606 427 aa19.86■□□□□ 0.77
COL9A3-210ENST00000472880 AP1S1P61966 158 aa19.86■□□□□ 0.77
COL9A3-210ENST00000472880 POLR2LP62875 67 aaKnown RBP19.86■□□□□ 0.77
COL9A3-210ENST00000472880 KLHL30Q0D2K2 578 aa19.86■□□□□ 0.77
COL9A3-210ENST00000472880 RALGDSQ12967 914 aa19.86■□□□□ 0.77
COL9A3-210ENST00000472880 TMCO4Q5TGY1 634 aa19.86■□□□□ 0.77
COL9A3-210ENST00000472880 CYP4V2Q6ZWL3 525 aaPredicted RBP19.86■□□□□ 0.77
COL9A3-210ENST00000472880 ARL14Q8N4G2 192 aa19.86■□□□□ 0.77
COL9A3-210ENST00000472880 LZTR1Q8N653 840 aa19.86■□□□□ 0.77
COL9A3-210ENST00000472880 PLA2G15Q8NCC3 412 aa19.86■□□□□ 0.77
COL9A3-210ENST00000472880 SLC46A1Q96NT5 459 aa19.86■□□□□ 0.77
COL9A3-210ENST00000472880 DPH1Q9BZG8 443 aa19.86■□□□□ 0.77
COL9A3-210ENST00000472880 MRPL47Q9HD33 250 aaKnown RBP19.86■□□□□ 0.77
COL9A3-210ENST00000472880 AIPL1Q9NZN9 384 aa19.86■□□□□ 0.77
COL9A3-210ENST00000472880 TMEM63CQ9P1W3 806 aa19.86■□□□□ 0.77
COL9A3-210ENST00000472880 MYO1AQ9UBC5 1043 aa19.86■□□□□ 0.77
COL9A3-210ENST00000472880 SEPT3Q9UH03 358 aa19.86■□□□□ 0.77
COL9A3-210ENST00000472880 SMG1Q96Q15 3661 aaKnown RBP19.86■□□□□ 0.77
COL9A3-210ENST00000472880 CCDC187A0A096LP49 1063 aa19.85■□□□□ 0.77
COL9A3-210ENST00000472880 A0A1W2PQC6 194 aa19.85■□□□□ 0.77
COL9A3-210ENST00000472880 H3BRJ5 948 aa19.85■□□□□ 0.77
COL9A3-210ENST00000472880 MYBL1P10243 752 aa19.85■□□□□ 0.77
COL9A3-210ENST00000472880 KELP23276 732 aa19.85■□□□□ 0.77
COL9A3-210ENST00000472880 PRKCIP41743 596 aa19.85■□□□□ 0.77
COL9A3-210ENST00000472880 HCAR3P49019 387 aa19.85■□□□□ 0.77
COL9A3-210ENST00000472880 SCNN1BP51168 640 aa19.85■□□□□ 0.77
COL9A3-210ENST00000472880 PDX1P52945 283 aa19.85■□□□□ 0.77
COL9A3-210ENST00000472880 KIAA1024LP59773 190 aa19.85■□□□□ 0.77
COL9A3-210ENST00000472880 NSUN2Q08J23 767 aaKnown RBP eCLIP19.85■□□□□ 0.77
COL9A3-210ENST00000472880 DPYSQ14117 519 aa19.85■□□□□ 0.77
COL9A3-210ENST00000472880 ZNF235Q14590 738 aa19.85■□□□□ 0.77
COL9A3-210ENST00000472880 E4F1Q66K89 784 aaPredicted RBP19.85■□□□□ 0.77
COL9A3-210ENST00000472880 LIPIQ6XZB0 460 aa19.85■□□□□ 0.77
COL9A3-210ENST00000472880 DPPA4Q7L190 304 aa19.85■□□□□ 0.77
COL9A3-210ENST00000472880 OR6C4Q8NGE1 309 aa19.85■□□□□ 0.77
COL9A3-210ENST00000472880 CCDC97Q96F63 343 aaPredicted RBP19.85■□□□□ 0.77
COL9A3-210ENST00000472880 PSKH2Q96QS6 385 aa19.85■□□□□ 0.77
COL9A3-210ENST00000472880 GFM1Q96RP9 751 aaKnown RBP19.85■□□□□ 0.77
COL9A3-210ENST00000472880 RBM15Q96T37 977 aaKnown RBP eCLIP19.85■□□□□ 0.77
COL9A3-210ENST00000472880 CPNE5Q9HCH3 593 aa19.85■□□□□ 0.77
COL9A3-210ENST00000472880 CWC15Q9P013 229 aaKnown RBP19.85■□□□□ 0.77
COL9A3-210ENST00000472880 DGKBQ9Y6T7 804 aa19.85■□□□□ 0.77
COL9A3-210ENST00000472880 DDX3XO00571 662 aaKnown RBP eCLIP19.84■□□□□ 0.77
COL9A3-210ENST00000472880 NTN3O00634 580 aaPredicted RBP19.84■□□□□ 0.77
COL9A3-210ENST00000472880 CASC3O15234 703 aaKnown RBP19.84■□□□□ 0.77
COL9A3-210ENST00000472880 ARL4AP40617 200 aa19.84■□□□□ 0.77
COL9A3-210ENST00000472880 MLLT3P42568 568 aaPredicted RBP19.84■□□□□ 0.77
COL9A3-210ENST00000472880 LBRQ14739 615 aaKnown RBP19.84■□□□□ 0.77
COL9A3-210ENST00000472880 ARHGAP40Q5TG30 622 aa19.84■□□□□ 0.77
COL9A3-210ENST00000472880 NYAP1Q6ZVC0 841 aa19.84■□□□□ 0.77
COL9A3-210ENST00000472880 OR56A4Q8NGH8 313 aa19.84■□□□□ 0.77
COL9A3-210ENST00000472880 OR1E3Q8WZA6 343 aa19.84■□□□□ 0.77
COL9A3-210ENST00000472880 FUBP1Q96AE4 644 aaKnown RBP19.84■□□□□ 0.77
COL9A3-210ENST00000472880 PRR11Q96HE9 360 aaPredicted RBP19.84■□□□□ 0.77
COL9A3-210ENST00000472880 ZNF599Q96NL3 588 aa19.84■□□□□ 0.77
COL9A3-210ENST00000472880 BPTFQ12830 3046 aa19.84■□□□□ 0.77
COL9A3-210ENST00000472880 RP1P56715 2156 aa19.84■□□□□ 0.77
COL9A3-210ENST00000472880 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.83■□□□□ 0.77
COL9A3-210ENST00000472880 PMS2P1A4D2B8 440 aa19.83■□□□□ 0.77
COL9A3-210ENST00000472880 CDRT15L2A8MXV6 281 aa19.83■□□□□ 0.77
COL9A3-210ENST00000472880 D6RAR5 112 aa19.83■□□□□ 0.77
COL9A3-210ENST00000472880 ERVH48-1M5A8F1 160 aa19.83■□□□□ 0.77
COL9A3-210ENST00000472880 TRAFD1O14545 582 aaPredicted RBP19.83■□□□□ 0.77
COL9A3-210ENST00000472880 C1QL1O75973 258 aa19.83■□□□□ 0.77
COL9A3-210ENST00000472880 TNFSF15O95150 251 aa19.83■□□□□ 0.77
COL9A3-210ENST00000472880 RPLP0P05388 317 aaKnown RBP19.83■□□□□ 0.77
COL9A3-210ENST00000472880 PCK1P35558 622 aa19.83■□□□□ 0.77
COL9A3-210ENST00000472880 ACOX1Q15067 660 aa19.83■□□□□ 0.77
COL9A3-210ENST00000472880 SMTNL2Q2TAL5 461 aa19.83■□□□□ 0.77
COL9A3-210ENST00000472880 TMCO3Q6UWJ1 677 aa19.83■□□□□ 0.77
COL9A3-210ENST00000472880 TP53INP2Q8IXH6 220 aa19.83■□□□□ 0.77
COL9A3-210ENST00000472880 LIN37Q96GY3 246 aaPredicted RBP19.83■□□□□ 0.77
COL9A3-210ENST00000472880 STRADBQ9C0K7 418 aa19.83■□□□□ 0.77
COL9A3-210ENST00000472880 WDR26Q9H7D7 661 aa19.83■□□□□ 0.77
COL9A3-210ENST00000472880 EPB41L5Q9HCM4 733 aa19.83■□□□□ 0.77
COL9A3-210ENST00000472880 FGF22Q9HCT0 170 aa19.83■□□□□ 0.77
COL9A3-210ENST00000472880 RABGEF1Q9UJ41 708 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms