RNA–Protein interactions for RNA: ENST00000471640.1

NCKAP1-203, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 306 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-203ENST00000471640 FOXD4Q12950 439 aaPredicted RBP2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 TAF11Q15544 211 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 EFNB3Q15768 340 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 KRTAP24-1Q3LI83 254 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 ACCSLQ4AC99 568 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 ZNF667Q5HYK9 610 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 OTUD3Q5T2D3 398 aaPredicted RBP2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 CCNI2Q6ZMN8 369 aaPredicted RBP2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 LDHAL6AQ6ZMR3 332 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 KRBA2Q6ZNG9 492 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 C9orf139Q6ZV77 190 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 LRRC8DQ7L1W4 858 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 ZNF771Q7L3S4 317 aaPredicted RBP2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 TADA2BQ86TJ2 420 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 SFR1Q86XK3 245 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 TMTC1Q8IUR5 882 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 ANKRD18AQ8IVF6 992 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 MAB21L3Q8N8X9 362 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 AGBL3Q8NEM8 1001 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 RUFY2Q8WXA3 655 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 TANKQ92844 425 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 CD101Q93033 1021 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 C3orf30Q96M34 536 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 UHRF2Q96PU4 802 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 NODALQ96S42 347 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 SIN3AQ96ST3 1273 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 EPYCQ99645 322 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 PHF7Q9BWX1 381 aaPredicted RBP2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 SNTG1Q9NSN8 517 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 BEX4Q9NWD9 120 aaPredicted RBP2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 HCN3Q9P1Z3 774 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 CNOT7Q9UIV1 285 aaKnown RBP2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 ERRFI1Q9UJM3 462 aaPredicted RBP2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 SNX9Q9Y5X1 595 aa2.37□□□□□ -2.03
NCKAP1-203ENST00000471640 SCN5AQ14524 2016 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 FAM172BPA6NC97 362 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 AKR1B15C9JRZ8 316 aaPredicted RBP2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 IFRD1O00458 451 aaPredicted RBP2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 PLRG1O43660 514 aaKnown RBP2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 MT-CYBP00156 380 aaPredicted RBP2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 HEXAP06865 529 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 SP1P08047 785 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 MMP2P08253 660 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 IRF1P10914 325 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 ETFAP13804 333 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 HSD3B1P14060 373 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 AGAP20933 346 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 TCEA1P23193 301 aaKnown RBP2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 PGM1P36871 562 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 HALP42357 657 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 NLRP5P59047 1200 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 ZBTB17Q13105 803 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 VEPH1Q14D04 833 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 HIST2H2ACQ16777 129 aaPredicted RBP2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 SYT16Q17RD7 645 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 KRT24Q2M2I5 525 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 TCTN1Q2MV58 587 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 ZNF766Q5HY98 468 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 STPG1Q5TH74 334 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 TMEM81Q6P7N7 255 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 GDPD4Q6W3E5 623 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 MEX3BQ6ZN04 569 aaKnown RBP2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 FOXL2NBQ6ZUU3 175 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 LINGO2Q7L985 606 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 RRM2BQ7LG56 351 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 SMIM29Q86T20 159 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 DSELQ8IZU8 1212 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 BEST2Q8NFU1 509 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 SPATA20Q8TB22 786 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 LNX1Q8TBB1 728 aaPredicted RBP2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 NEK9Q8TD19 979 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 PPM1EQ8WY54 764 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 HERVK_113Q902F9 699 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 FIG4Q92562 907 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 ELP4Q96EB1 424 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 TMEM19Q96HH6 336 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 ZNF570Q96NI8 536 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 KXD1Q9BQD3 176 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 SPRY4Q9C004 299 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 INTS2Q9H0H0 1204 aaKnown RBP2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 MMP28Q9H239 520 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 PCDH9Q9HC56 1237 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 NOX4Q9NPH5 578 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 RIC8AQ9NPQ8 531 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 CNGB3Q9NQW8 809 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 MCM9Q9NXL9 1143 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 GPR52Q9Y2T5 361 aa2.36□□□□□ -2.03
NCKAP1-203ENST00000471640 A0A0G2JPF8 293 aa2.35□□□□□ -2.03
NCKAP1-203ENST00000471640 A0A1W2PS18 150 aa2.35□□□□□ -2.03
NCKAP1-203ENST00000471640 GOLGA6L9A6NEM1 432 aa2.35□□□□□ -2.03
NCKAP1-203ENST00000471640 HNRNPCL3B7ZW38 293 aa2.35□□□□□ -2.03
NCKAP1-203ENST00000471640 TAF4O00268 1085 aa2.35□□□□□ -2.03
NCKAP1-203ENST00000471640 SOCS6O14544 535 aa2.35□□□□□ -2.03
NCKAP1-203ENST00000471640 MID1O15344 667 aa2.35□□□□□ -2.03
NCKAP1-203ENST00000471640 LMX1BO60663 402 aa2.35□□□□□ -2.03
NCKAP1-203ENST00000471640 HNRNPCL1O60812 293 aaKnown RBP2.35□□□□□ -2.03
NCKAP1-203ENST00000471640 IFIT1P09914 478 aaKnown RBP2.35□□□□□ -2.03
NCKAP1-203ENST00000471640 HNRNPCL4P0DMR1 293 aa2.35□□□□□ -2.03
NCKAP1-203ENST00000471640 RRM1P23921 792 aa2.35□□□□□ -2.03
NCKAP1-203ENST00000471640 ARL1P40616 181 aaPredicted RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms