RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 PRDM6Q9NQX0 595 aa9.81□□□□□ -0.84
CCM2-204ENST00000470837 C20orf96Q9NUD7 363 aaPredicted RBP9.81□□□□□ -0.84
CCM2-204ENST00000470837 NSMCE4AQ9NXX6 385 aa9.81□□□□□ -0.84
CCM2-204ENST00000470837 ZFATQ9P243 1243 aa9.81□□□□□ -0.84
CCM2-204ENST00000470837 DKK3Q9UBP4 350 aa9.81□□□□□ -0.84
CCM2-204ENST00000470837 CA14Q9ULX7 337 aa9.81□□□□□ -0.84
CCM2-204ENST00000470837 NDRG2Q9UN36 371 aaKnown RBP9.81□□□□□ -0.84
CCM2-204ENST00000470837 DENND4AQ7Z401 1863 aa9.81□□□□□ -0.84
CCM2-204ENST00000470837 A0A0J9YYE9 177 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 C1orf232A0A0U1RR37 186 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 TCRBV9S1A1TA0A576 114 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 CCDC78A2IDD5 438 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 CAPN8A6NHC0 703 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 UPK3BL1B0FP48 263 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 UPK3BL2E5RIL1 263 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 POC1B-GALNT4F8VUJ3 575 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 STK25O00506 426 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 NEMP1O14524 444 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 MAP2K7O14733 419 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 FZD6O60353 706 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 ADH1BP00325 375 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 PRLP01236 227 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 TRBC1P01850 177 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 PIRTP0C851 137 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 HOXB2P14652 356 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 CTPS1P17812 591 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 LPOP22079 712 aaPredicted RBP9.8□□□□□ -0.84
CCM2-204ENST00000470837 ITGB7P26010 798 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 SLC8A1P32418 973 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 HADHAP40939 763 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 WASP42768 502 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 PSMD8P48556 350 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 SUOXP51687 545 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 GPX6P59796 221 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 ELP6Q0PNE2 266 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 FRG1Q14331 258 aaKnown RBP9.8□□□□□ -0.84
CCM2-204ENST00000470837 TSTD2Q5T7W7 516 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 EMC10Q5UCC4 262 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 ZDHHC20Q5W0Z9 365 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 STEAP4Q687X5 459 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 ZNF776Q68DI1 518 aaPredicted RBP9.8□□□□□ -0.84
CCM2-204ENST00000470837 FSTL4Q6MZW2 842 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 ZNF449Q6P9G9 518 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 CES3Q6UWW8 571 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 CYS1Q717R9 158 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 TMEM135Q86UB9 458 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 KCNMB4Q86W47 210 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 LRRC6Q86X45 466 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 IGDCC3Q8IVU1 814 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 SFTPA1Q8IWL2 248 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 UBALD2Q8IYN6 164 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 IQCKQ8N0W5 287 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 OR6P1Q8NGX9 317 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 PIP4K2CQ8TBX8 421 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 GANCQ8TET4 914 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 PIH1D2Q8WWB5 315 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.8□□□□□ -0.84
CCM2-204ENST00000470837 ECHDC3Q96DC8 303 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 MFSD3Q96ES6 412 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 SCRN2Q96FV2 425 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 CERS2Q96G23 380 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 FAM167BQ9BTA0 163 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 MTG2Q9H4K7 406 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 ACSS3Q9H6R3 686 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 ZFYVE1Q9HBF4 777 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 FBRSL1Q9HCM7 1045 aaKnown RBP9.8□□□□□ -0.84
CCM2-204ENST00000470837 PRSS16Q9NQE7 514 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 ARHGEF3Q9NR81 526 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 ZNF446Q9NWS9 450 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 BCCIPQ9P287 314 aaKnown RBP eCLIP9.8□□□□□ -0.84
CCM2-204ENST00000470837 WNT16Q9UBV4 365 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 SLC24A2Q9UI40 661 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 RIMKLBQ9ULI2 386 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 ZNF711Q9Y462 761 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 ARL5AQ9Y689 179 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 WASF2Q9Y6W5 498 aa9.8□□□□□ -0.84
CCM2-204ENST00000470837 C16orf96A6NNT2 1141 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 RGS16O15492 202 aaPredicted RBP9.79□□□□□ -0.84
CCM2-204ENST00000470837 ATG13O75143 517 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 RNF40O75150 1001 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 CDH16O75309 829 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 RPP40O75818 363 aaKnown RBP9.79□□□□□ -0.84
CCM2-204ENST00000470837 VAPBO95292 243 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 DNTTP04053 509 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 ACADMP11310 421 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 ZNF30P17039 623 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 NMBRP28336 390 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 HNF1BP35680 557 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 KIR2DL1P43626 348 aaPredicted RBP9.79□□□□□ -0.84
CCM2-204ENST00000470837 SLCO1A2P46721 670 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 NEK3P51956 506 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 ILF2Q12905 390 aaKnown RBP9.79□□□□□ -0.84
CCM2-204ENST00000470837 ENPP2Q13822 863 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 IHHQ14623 411 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 CNGA3Q16281 694 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 UGP2Q16851 508 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 POM121L1PQ3SYA9 428 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 TTC31Q49AM3 519 aaPredicted RBP9.79□□□□□ -0.84
CCM2-204ENST00000470837 KIAA0930Q6ICG6 404 aaPredicted RBP9.79□□□□□ -0.84
CCM2-204ENST00000470837 MRNIPQ6NTE8 343 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms