RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 OR52K1Q8NGK4 314 aa8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 OR2T3Q8NH03 318 aa8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 HMGB4Q8WW32 186 aa8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 VOPP1Q96AW1 172 aa8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 ARRDC3Q96B67 414 aa8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 RMDN1Q96DB5 314 aa8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 PWWP2AQ96N64 755 aa8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 SMIM14Q96QK8 99 aa8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 HHIPQ96QV1 700 aa8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 TRIB3Q96RU7 358 aa8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 FAM129BQ96TA1 746 aa8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 NELL2Q99435 816 aa8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 C1QTNF2Q9BXJ5 285 aa8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 OSBPL1AQ9BXW6 950 aa8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 CPEB1Q9BZB8 566 aaKnown RBP8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 RSPH9Q9H1X1 276 aaPredicted RBP8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 NEUROG2Q9H2A3 272 aa8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 CHRDQ9H2X0 955 aa8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 GDF3Q9NR23 364 aa8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 FAM114A2Q9NRY5 505 aa8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 SARDHQ9UL12 918 aa8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 SHOC2Q9UQ13 582 aa8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 SIT1Q9Y3P8 196 aa8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 PCDHB9Q9Y5E1 797 aa8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 TMEM131Q92545 1883 aa8.45□□□□□ -1.06
GAPVD1-213ENST00000469498 CHURC1-FNTBB4DL54 471 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 TRAFD1O14545 582 aaPredicted RBP8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 MID1O15344 667 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 TP73O15350 636 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 HTRA2O43464 458 aaPredicted RBP8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 RNASEH1O60930 286 aaKnown RBP8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 BANF1O75531 89 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 SUN1O94901 812 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 NDST3O95803 873 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 PRLP01236 227 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 ALPIP09923 528 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 ATXN1LP0C7T5 689 aaKnown RBP8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 PIRTP0C851 137 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 ITIH2P19823 946 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 ITGB7P26010 798 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 ADRA1AP35348 466 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 CARSP49589 748 aaKnown RBP8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 EPHB1P54762 984 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 SESN2P58004 480 aaPredicted RBP8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 RPS14P62263 151 aaKnown RBP8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 SATB1Q01826 763 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 SEMG2Q02383 582 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 CDK18Q07002 472 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 SEPT6Q14141 434 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 AGERQ15109 404 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 PTPRRQ15256 657 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 CRY1Q16526 586 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 ZNF805Q5CZA5 627 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 DENND2CQ68D51 928 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 SYT13Q7L8C5 426 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 HOOK3Q86VS8 718 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 CCDC25Q86WR0 208 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 DNAAF3Q8N9W5 541 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 TMIEQ8NEW7 156 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 TSTD1Q8NFU3 115 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 FBXO25Q8TCJ0 367 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 SEC14L1Q92503 715 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 ART4Q93070 314 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 CLDN23Q96B33 292 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 ZNF641Q96N77 438 aaPredicted RBP8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 OSBPL6Q9BZF3 934 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 MKRN2Q9H000 416 aaKnown RBP8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 ALG2Q9H553 416 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 SUV39H2Q9H5I1 410 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 FBRSQ9HAH7 460 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 CD248Q9HCU0 757 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 ATP13A2Q9NQ11 1180 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 DYRK4Q9NR20 520 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 BCCIPQ9P287 314 aaKnown RBP eCLIP8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 PPM1HQ9ULR3 514 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 NFU1Q9UMS0 254 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 RALGAPA1Q6GYQ0 2036 aa8.44□□□□□ -1.06
GAPVD1-213ENST00000469498 TDRD6O60522 2096 aaKnown RBP8.43□□□□□ -1.06
GAPVD1-213ENST00000469498 A0A0U1RQS6 177 aa8.43□□□□□ -1.06
GAPVD1-213ENST00000469498 LOC285095A0A1B0GVY8 99 aa8.43□□□□□ -1.06
GAPVD1-213ENST00000469498 A0A1W2PP55 124 aa8.43□□□□□ -1.06
GAPVD1-213ENST00000469498 TSPAN11A1L157 253 aa8.43□□□□□ -1.06
GAPVD1-213ENST00000469498 CCDC78A2IDD5 438 aa8.43□□□□□ -1.06
GAPVD1-213ENST00000469498 C16orf96A6NNT2 1141 aa8.43□□□□□ -1.06
GAPVD1-213ENST00000469498 A8MX80 341 aa8.43□□□□□ -1.06
GAPVD1-213ENST00000469498 UPK3BL1B0FP48 263 aa8.43□□□□□ -1.06
GAPVD1-213ENST00000469498 UPK3BL2E5RIL1 263 aa8.43□□□□□ -1.06
GAPVD1-213ENST00000469498 NDC80O14777 642 aa8.43□□□□□ -1.06
GAPVD1-213ENST00000469498 PI15O43692 258 aa8.43□□□□□ -1.06
GAPVD1-213ENST00000469498 FZD6O60353 706 aa8.43□□□□□ -1.06
GAPVD1-213ENST00000469498 ATG13O75143 517 aa8.43□□□□□ -1.06
GAPVD1-213ENST00000469498 AVILO75366 819 aa8.43□□□□□ -1.06
GAPVD1-213ENST00000469498 DNTTP04053 509 aa8.43□□□□□ -1.06
GAPVD1-213ENST00000469498 FGF1P05230 155 aa8.43□□□□□ -1.06
GAPVD1-213ENST00000469498 MYBL2P10244 700 aa8.43□□□□□ -1.06
GAPVD1-213ENST00000469498 ALADP13716 330 aa8.43□□□□□ -1.06
GAPVD1-213ENST00000469498 SNRPBP14678 240 aaKnown RBP8.43□□□□□ -1.06
GAPVD1-213ENST00000469498 TPH1P17752 444 aa8.43□□□□□ -1.06
GAPVD1-213ENST00000469498 GABRG2P18507 467 aa8.43□□□□□ -1.06
GAPVD1-213ENST00000469498 HLA-DPA1P20036 260 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms