RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 AGAP9Q5VTM2 703 aa17.91■□□□□ 0.46
MCF2L-221ENST00000469415 KIAA0930Q6ICG6 404 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-221ENST00000469415 KLC3Q6P597 504 aa17.91■□□□□ 0.46
MCF2L-221ENST00000469415 SLC24A5Q71RS6 500 aa17.91■□□□□ 0.46
MCF2L-221ENST00000469415 DDIASQ8IXT1 998 aa17.91■□□□□ 0.46
MCF2L-221ENST00000469415 GBP5Q96PP8 586 aa17.91■□□□□ 0.46
MCF2L-221ENST00000469415 KLHL4Q9C0H6 718 aa17.91■□□□□ 0.46
MCF2L-221ENST00000469415 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.91■□□□□ 0.46
MCF2L-221ENST00000469415 UBXN8O00124 270 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 IPO13O94829 963 aaKnown RBP17.9■□□□□ 0.46
MCF2L-221ENST00000469415 LTA4HP09960 611 aaKnown RBP17.9■□□□□ 0.46
MCF2L-221ENST00000469415 FMO4P31512 558 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 ACLYP53396 1101 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 MSLNQ13421 630 aaPredicted RBP17.9■□□□□ 0.46
MCF2L-221ENST00000469415 PAOXQ6QHF9 649 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 DBF4BQ8NFT6 615 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 ZNF512Q96ME7 567 aaPredicted RBP17.9■□□□□ 0.46
MCF2L-221ENST00000469415 GLT1D1Q96MS3 346 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 PCDHGC4Q9Y5F7 938 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 CCDC162PA2VCL2 907 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 UBFD1O14562 309 aaKnown RBP17.9■□□□□ 0.46
MCF2L-221ENST00000469415 CACNG3O60359 315 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 PGM3O95394 542 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 KIF19Q2TAC6 998 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 ARTNQ5T4W7 220 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 CILP2Q8IUL8 1156 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 PTERQ96BW5 349 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 ADAM12O43184 909 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 PEX1O43933 1283 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 RGRP47804 291 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 POU4F1Q01851 419 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 MED21Q13503 144 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 PTK2BQ14289 1009 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 NRF1Q16656 503 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 RTP2Q5QGT7 225 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 FOXB2Q5VYV0 432 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 FAM117BQ6P1L5 589 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 DENND1CQ8IV53 801 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 COLGALT2Q8IYK4 626 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 CEP70Q8NHQ1 597 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 C3orf30Q96M34 536 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 LRGUKQ96M69 825 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 ANKRD27Q96NW4 1050 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 TSC22D3Q99576 134 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 CLIC5Q9NZA1 410 aa17.9■□□□□ 0.46
MCF2L-221ENST00000469415 MAGEA13PA6NCF6 341 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 H3BNX3 289 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 CBX4O00257 560 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 UBDO15205 165 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 KIF1CO43896 1103 aaKnown RBP17.89■□□□□ 0.45
MCF2L-221ENST00000469415 BMP1P13497 986 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 GFAPP14136 432 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 ALDH1A3P47895 512 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 FOXA1P55317 472 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 LBRQ14739 615 aaKnown RBP17.89■□□□□ 0.45
MCF2L-221ENST00000469415 TECRLQ5HYJ1 363 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 PTGR2Q8N8N7 351 aaPredicted RBP17.89■□□□□ 0.45
MCF2L-221ENST00000469415 ATP6V0D2Q8N8Y2 350 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 SPDYE1Q8NFV5 336 aaPredicted RBP17.89■□□□□ 0.45
MCF2L-221ENST00000469415 PIP4K2CQ8TBX8 421 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 RPL10LQ96L21 214 aaKnown RBP17.89■□□□□ 0.45
MCF2L-221ENST00000469415 HBEGFQ99075 208 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 TRIM62Q9BVG3 475 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 EFCAB1Q9HAE3 211 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 APPL1Q9UKG1 709 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 E7ENX8 843 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 AP3B1O00203 1094 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 AOC2O75106 756 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 RHOQP17081 205 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 HADHAP40939 763 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 CASP2P42575 452 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 FASTKQ14296 549 aaKnown RBP17.89■□□□□ 0.45
MCF2L-221ENST00000469415 NFE2Q16621 373 aaPredicted RBP17.89■□□□□ 0.45
MCF2L-221ENST00000469415 OR52E8Q6IFG1 317 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 RP9Q8TA86 221 aaKnown RBP17.89■□□□□ 0.45
MCF2L-221ENST00000469415 TRPC4APQ8TEL6 797 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 ATP6V1E2Q96A05 226 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 CNBD2Q96M20 576 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 ZBTB26Q9HCK0 441 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 SEMA4BQ9NPR2 832 aaPredicted RBP17.89■□□□□ 0.45
MCF2L-221ENST00000469415 SCML2Q9UQR0 700 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 DTNAQ9Y4J8 743 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 TIMM22Q9Y584 194 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 MYO7AQ13402 2215 aa17.89■□□□□ 0.45
MCF2L-221ENST00000469415 A0A1B0GTL3 188 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 TCAF2A6NFQ2 919 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 TPST1O60507 370 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 GJB5O95377 273 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 S1PR4O95977 384 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 CES1P23141 567 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 ZNF135P52742 658 aaPredicted RBP17.88■□□□□ 0.45
MCF2L-221ENST00000469415 IYDQ6PHW0 289 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 C16orf89Q6UX73 402 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 ARRDC2Q8TBH0 407 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 GATA6Q92908 595 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 SLC39A13Q96H72 371 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 FBXO44Q9H4M3 255 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 SCN10AQ9Y5Y9 1956 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 A8MX80 341 aa17.88■□□□□ 0.45
MCF2L-221ENST00000469415 ATP5BP06576 529 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms