RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 ZNF131P52739 623 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 CLDN6P56747 220 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 SESN3P58005 492 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 RBP5P82980 135 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 GTF2BQ00403 316 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 IL9RQ01113 521 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 ST3GAL1Q11201 340 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 OVGP1Q12889 678 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 ZNF234Q14588 700 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 ANKRD1Q15327 319 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 SHBQ15464 509 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 SLC45A4Q5BKX6 768 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 FIGNQ5HY92 759 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 KCNT1Q5JUK3 1230 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 ADALQ6DHV7 355 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 SLC39A4Q6P5W5 647 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 BORAQ6PGQ7 559 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 USP30Q70CQ3 517 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 ANKS1BQ7Z6G8 1248 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 IQCHQ86VS3 1027 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 ZSCAN30Q86W11 494 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 PASD1Q8IV76 773 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 NLGN4XQ8N0W4 816 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 CBARPQ8N350 705 aaPredicted RBP5.65□□□□□ -1.5
PTCD3-207ENST00000467273 CCDC89Q8N998 374 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 EXD3Q8N9H8 876 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 DLG3Q92796 817 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 HPS3Q969F9 1004 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 FBXO32Q969P5 355 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 HVCN1Q96D96 273 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 AHCYL2Q96HN2 611 aaKnown RBP5.65□□□□□ -1.5
PTCD3-207ENST00000467273 VCPIP1Q96JH7 1222 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 SLC46A1Q96NT5 459 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 CCNL2Q96S94 520 aaPredicted RBP5.65□□□□□ -1.5
PTCD3-207ENST00000467273 NACA2Q9H009 215 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 FOXP1Q9H334 677 aaPredicted RBP5.65□□□□□ -1.5
PTCD3-207ENST00000467273 ST6GALNAC4Q9H4F1 302 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 PCIF1Q9H4Z3 704 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 PARVGQ9HBI0 331 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 USP29Q9HBJ7 922 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 ELOVL2Q9NXB9 296 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 PCDHGA8Q9Y5G5 932 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 B3GALT1Q9Y5Z6 326 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 HS3ST3A1Q9Y663 406 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 SLCO1B1Q9Y6L6 691 aa5.65□□□□□ -1.5
PTCD3-207ENST00000467273 ATP8B3O60423 1300 aa5.65□□□□□ -1.51
PTCD3-207ENST00000467273 CENPEQ02224 2701 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 FAM90A27PA6NNH2 459 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 CDRT15L2A8MXV6 281 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 C10orf142B7Z368 130 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 K7ENM7 598 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 AKAP10O43572 662 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 TSPAN6O43657 245 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 TLR5O60602 858 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 ATP2C2O75185 946 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 USP12O75317 370 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 PPFIA2O75334 1257 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 TACC1O75410 805 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 FBXO21O94952 628 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 FSBPO95073 299 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 CTDNEP1O95476 244 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 MT-CO1P00395 513 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 DNTTP04053 509 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 IGHV4-34P06331 123 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 ITGB6P18564 788 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 RBMS1P29558 406 aaKnown RBP5.64□□□□□ -1.51
PTCD3-207ENST00000467273 ATP5C1P36542 298 aaKnown RBP5.64□□□□□ -1.51
PTCD3-207ENST00000467273 CCR5P51681 352 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 SLC12A3P55017 1021 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 MFAP3P55082 362 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 NXPH1P58417 271 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 TFAMQ00059 246 aaKnown RBP5.64□□□□□ -1.51
PTCD3-207ENST00000467273 TLE1Q04724 770 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 CDSNQ15517 529 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 TERF2Q15554 542 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 CCDC142Q17RM4 750 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 HS1BP3Q53T59 392 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 INO80DQ53TQ3 878 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-207ENST00000467273 TTC38Q5R3I4 469 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 C10orf62Q5T681 223 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-207ENST00000467273 C1QTNF12Q5T7M4 302 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 KIAA1614Q5VZ46 1190 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 KIAA0895LQ68EN5 471 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 CRELD2Q6UXH1 353 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-207ENST00000467273 SERPINA13PQ6UXR4 307 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 KDM7AQ6ZMT4 941 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 TPGS1Q6ZTW0 290 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 KCNK18Q7Z418 384 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 CLEC14AQ86T13 490 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 ZBTB46Q86UZ6 589 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 FAM124AQ86V42 546 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 DCP2Q8IU60 420 aaKnown RBP5.64□□□□□ -1.51
PTCD3-207ENST00000467273 BRSK2Q8IWQ3 736 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 CMIPQ8IY22 773 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 ZNF276Q8N554 614 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 FAM26EQ8N5C1 309 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 CSGALNACT2Q8N6G5 542 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 C4orf32Q8N8J7 132 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 TEX19Q8NA77 164 aa5.64□□□□□ -1.51
PTCD3-207ENST00000467273 NETO2Q8NC67 525 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms