RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 PRPSAP1Q14558 356 aa13.96□□□□□ -0.17
UBA3-209ENST00000466763 STAT4Q14765 748 aa13.96□□□□□ -0.17
UBA3-209ENST00000466763 PTPRRQ15256 657 aa13.96□□□□□ -0.17
UBA3-209ENST00000466763 TEAD4Q15561 434 aa13.96□□□□□ -0.17
UBA3-209ENST00000466763 CSRP2Q16527 193 aa13.96□□□□□ -0.17
UBA3-209ENST00000466763 TMEM52BQ4KMG9 183 aa13.96□□□□□ -0.17
UBA3-209ENST00000466763 AASDHQ4L235 1098 aaPredicted RBP13.96□□□□□ -0.17
UBA3-209ENST00000466763 PLA2G2CQ5R387 149 aa13.96□□□□□ -0.17
UBA3-209ENST00000466763 CCDC70Q6NSX1 233 aa13.96□□□□□ -0.17
UBA3-209ENST00000466763 LAYNQ6UX15 382 aa13.96□□□□□ -0.17
UBA3-209ENST00000466763 ARHGEF18Q6ZSZ5 1173 aa13.96□□□□□ -0.17
UBA3-209ENST00000466763 KIAA2013Q8IYS2 634 aa13.96□□□□□ -0.17
UBA3-209ENST00000466763 TAB3Q8N5C8 712 aaPredicted RBP13.96□□□□□ -0.17
UBA3-209ENST00000466763 PIH1D2Q8WWB5 315 aa13.96□□□□□ -0.17
UBA3-209ENST00000466763 SPATA13Q96N96 652 aa13.96□□□□□ -0.17
UBA3-209ENST00000466763 SMIM14Q96QK8 99 aa13.96□□□□□ -0.17
UBA3-209ENST00000466763 NAPGQ99747 312 aaPredicted RBP13.96□□□□□ -0.17
UBA3-209ENST00000466763 GTPBP2Q9BX10 602 aaKnown RBP13.96□□□□□ -0.17
UBA3-209ENST00000466763 ADGRE3Q9BY15 652 aa13.96□□□□□ -0.17
UBA3-209ENST00000466763 USP29Q9HBJ7 922 aa13.96□□□□□ -0.17
UBA3-209ENST00000466763 B4GALT6Q9UBX8 382 aa13.96□□□□□ -0.17
UBA3-209ENST00000466763 FAM153AQ9UHL3 310 aa13.96□□□□□ -0.17
UBA3-209ENST00000466763 SNX12Q9UMY4 172 aa13.96□□□□□ -0.17
UBA3-209ENST00000466763 SLC6A14Q9UN76 642 aa13.96□□□□□ -0.17
UBA3-209ENST00000466763 DMTF1Q9Y222 760 aa13.96□□□□□ -0.17
UBA3-209ENST00000466763 CA5BQ9Y2D0 317 aa13.96□□□□□ -0.17
UBA3-209ENST00000466763 KNL1Q8NG31 2342 aa13.96□□□□□ -0.18
UBA3-209ENST00000466763 ADAMTS9Q9P2N4 1935 aa13.96□□□□□ -0.18
UBA3-209ENST00000466763 A0A1B0GVT2 93 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 CTAGE9A4FU28 777 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 CFAP69A5D8W1 941 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 PRAMEF26H0Y7S4 382 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 WNT9AO14904 365 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 LRP3O75074 770 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 HNRNPA2B1P22626 353 aaKnown RBP13.95□□□□□ -0.18
UBA3-209ENST00000466763 PSMB4P28070 264 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 VIPR1P32241 457 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 HOXD12P35452 270 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 NUDT1P36639 197 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 MMP12P39900 470 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 AFF3P51826 1226 aaKnown RBP13.95□□□□□ -0.18
UBA3-209ENST00000466763 ATXN3P54252 364 aaPredicted RBP13.95□□□□□ -0.18
UBA3-209ENST00000466763 C21orf59P57076 290 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 RACK1P63244 317 aaKnown RBP13.95□□□□□ -0.18
UBA3-209ENST00000466763 CDK18Q07002 472 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 GALNT3Q14435 633 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 ACOX1Q15067 660 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 CCNG2Q16589 344 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 TMEM259Q4ZIN3 620 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 NAPEPLDQ6IQ20 393 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 PRR23CQ6ZRP0 262 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 DPPA4Q7L190 304 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 GSTA5Q7RTV2 222 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 GPR161Q8N6U8 529 aaKnown RBP13.95□□□□□ -0.18
UBA3-209ENST00000466763 IPMKQ8NFU5 416 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 COG1Q8WTW3 980 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 SCRN2Q96FV2 425 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 FCRL5Q96RD9 977 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 NAP1L3Q99457 506 aaPredicted RBP13.95□□□□□ -0.18
UBA3-209ENST00000466763 C1QTNF7Q9BXJ2 289 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 AP1M1Q9BXS5 423 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 GBA3Q9H227 469 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 SMARCAL1Q9NZC9 954 aa13.95□□□□□ -0.18
UBA3-209ENST00000466763 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.95□□□□□ -0.18
UBA3-209ENST00000466763 A0A0U1RQS6 177 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 C5orf60A6NFR6 353 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 PGRMC1O00264 195 aaKnown RBP13.94□□□□□ -0.18
UBA3-209ENST00000466763 SNPHO15079 494 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 ZNF185O15231 689 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 FZD6O60353 706 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 OPHN1O60890 802 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 ANXA9O76027 345 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 PRLP01236 227 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 C6P13671 934 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 TCP1P17987 556 aaKnown RBP13.94□□□□□ -0.18
UBA3-209ENST00000466763 CD38P28907 300 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 STIP1P31948 543 aaKnown RBP13.94□□□□□ -0.18
UBA3-209ENST00000466763 ACTN2P35609 894 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 HNF1BP35680 557 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 GEMP55040 296 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 GDF10P55107 478 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 WNT3AP56704 352 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 CLDN2P57739 230 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 FGL2Q14314 439 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 SIX1Q15475 284 aaPredicted RBP13.94□□□□□ -0.18
UBA3-209ENST00000466763 QPCTQ16769 361 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 LRRK1Q38SD2 2015 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 PEAR1Q5VY43 1037 aaPredicted RBP13.94□□□□□ -0.18
UBA3-209ENST00000466763 SLC23A3Q6PIS1 610 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 LIPIQ6XZB0 460 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 ZSCAN30Q86W11 494 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 RASGEF1CQ8N431 466 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 SLC25A41Q8N5S1 370 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 SKA1Q96BD8 255 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 OXNAD1Q96HP4 312 aaPredicted RBP13.94□□□□□ -0.18
UBA3-209ENST00000466763 CAPZA3Q96KX2 299 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 ORAI3Q9BRQ5 295 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 MLPHQ9BV36 600 aaPredicted RBP13.94□□□□□ -0.18
UBA3-209ENST00000466763 C1QTNF2Q9BXJ5 285 aa13.94□□□□□ -0.18
UBA3-209ENST00000466763 FSD1LQ9BXM9 530 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms