RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 PDCL3Q9H2J4 239 aa6.06□□□□□ -1.44
PTCD3-205ENST00000464541 NAALADL1Q9UQQ1 740 aa6.06□□□□□ -1.44
PTCD3-205ENST00000464541 LSM4Q9Y4Z0 139 aaKnown RBP6.06□□□□□ -1.44
PTCD3-205ENST00000464541 CPED1A4D0V7 1026 aa6.05□□□□□ -1.44
PTCD3-205ENST00000464541 EME2A4GXA9 379 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-205ENST00000464541 BCAT2O15382 392 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-205ENST00000464541 SEC14L5O43304 696 aa6.05□□□□□ -1.44
PTCD3-205ENST00000464541 SEC14L2O76054 403 aa6.05□□□□□ -1.44
PTCD3-205ENST00000464541 DAOP14920 347 aa6.05□□□□□ -1.44
PTCD3-205ENST00000464541 HNRNPH1P31943 449 aaKnown RBP6.05□□□□□ -1.44
PTCD3-205ENST00000464541 SHMT1P34896 483 aa6.05□□□□□ -1.44
PTCD3-205ENST00000464541 GNAQP50148 359 aa6.05□□□□□ -1.44
PTCD3-205ENST00000464541 PEX5P50542 639 aa6.05□□□□□ -1.44
PTCD3-205ENST00000464541 ART1P52961 327 aa6.05□□□□□ -1.44
PTCD3-205ENST00000464541 BNC1Q01954 994 aa6.05□□□□□ -1.44
PTCD3-205ENST00000464541 KRTAP1-1Q07627 177 aa6.05□□□□□ -1.44
PTCD3-205ENST00000464541 ASIC2Q16515 512 aa6.05□□□□□ -1.44
PTCD3-205ENST00000464541 FAM69BQ5VUD6 431 aa6.05□□□□□ -1.44
PTCD3-205ENST00000464541 PLEKHA7Q6IQ23 1121 aa6.05□□□□□ -1.44
PTCD3-205ENST00000464541 RBM23Q86U06 439 aaKnown RBP6.05□□□□□ -1.44
PTCD3-205ENST00000464541 NOXA1Q86UR1 476 aa6.05□□□□□ -1.44
PTCD3-205ENST00000464541 NEK9Q8TD19 979 aa6.05□□□□□ -1.44
PTCD3-205ENST00000464541 ERGIC1Q969X5 290 aa6.05□□□□□ -1.44
PTCD3-205ENST00000464541 RTP4Q96DX8 246 aa6.05□□□□□ -1.44
PTCD3-205ENST00000464541 NAF1Q96HR8 494 aaKnown RBP6.05□□□□□ -1.44
PTCD3-205ENST00000464541 FIZ1Q96SL8 496 aa6.05□□□□□ -1.44
PTCD3-205ENST00000464541 SLC26A6Q9BXS9 759 aa6.05□□□□□ -1.44
PTCD3-205ENST00000464541 GLIS2Q9BZE0 524 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-205ENST00000464541 RANBP17Q9H2T7 1088 aaKnown RBP6.05□□□□□ -1.44
PTCD3-205ENST00000464541 C6orf106Q9H6K1 298 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-205ENST00000464541 WDR26Q9H7D7 661 aa6.05□□□□□ -1.44
PTCD3-205ENST00000464541 DDX4Q9NQI0 724 aaKnown RBP6.05□□□□□ -1.44
PTCD3-205ENST00000464541 ZNF580Q9UK33 172 aa6.05□□□□□ -1.44
PTCD3-205ENST00000464541 ATXN2Q99700 1313 aaKnown RBP6.04□□□□□ -1.44
PTCD3-205ENST00000464541 A0A1W2PPH5 198 aa6.04□□□□□ -1.44
PTCD3-205ENST00000464541 J3KRW8 73 aa6.04□□□□□ -1.44
PTCD3-205ENST00000464541 IGHV4-30-4P0DP06 118 aa6.04□□□□□ -1.44
PTCD3-205ENST00000464541 ZNF12P17014 697 aa6.04□□□□□ -1.44
PTCD3-205ENST00000464541 DDIT3P35638 169 aa6.04□□□□□ -1.44
PTCD3-205ENST00000464541 PIGAP37287 484 aa6.04□□□□□ -1.44
PTCD3-205ENST00000464541 TUBA1BP68363 451 aa6.04□□□□□ -1.44
PTCD3-205ENST00000464541 G3BP1Q13283 466 aaKnown RBP eCLIP6.04□□□□□ -1.44
PTCD3-205ENST00000464541 ZNF585BQ52M93 769 aa6.04□□□□□ -1.44
PTCD3-205ENST00000464541 ZNF324BQ6AW86 544 aaPredicted RBP6.04□□□□□ -1.44
PTCD3-205ENST00000464541 R3HCC1LQ7Z5L2 792 aaKnown RBP6.04□□□□□ -1.44
PTCD3-205ENST00000464541 ZC3HC1Q86WB0 502 aaKnown RBP6.04□□□□□ -1.44
PTCD3-205ENST00000464541 TMED6Q8WW62 240 aa6.04□□□□□ -1.44
PTCD3-205ENST00000464541 FAM84BQ96KN1 310 aaPredicted RBP6.04□□□□□ -1.44
PTCD3-205ENST00000464541 ASAH2Q9NR71 780 aa6.04□□□□□ -1.44
PTCD3-205ENST00000464541 CAMK2AQ9UQM7 478 aa6.04□□□□□ -1.44
PTCD3-205ENST00000464541 NFS1Q9Y697 457 aa6.04□□□□□ -1.44
PTCD3-205ENST00000464541 STON1Q9Y6Q2 735 aa6.04□□□□□ -1.44
PTCD3-205ENST00000464541 IGLV5-37A0A075B6J1 123 aa6.03□□□□□ -1.44
PTCD3-205ENST00000464541 TMEM202A6NGA9 273 aa6.03□□□□□ -1.44
PTCD3-205ENST00000464541 GTPBP1O00178 669 aaKnown RBP6.03□□□□□ -1.44
PTCD3-205ENST00000464541 UBL4AP11441 157 aa6.03□□□□□ -1.44
PTCD3-205ENST00000464541 PLA2G2AP14555 144 aa6.03□□□□□ -1.44
PTCD3-205ENST00000464541 ITGB8P26012 769 aa6.03□□□□□ -1.44
PTCD3-205ENST00000464541 RPL7AP62424 266 aaKnown RBP6.03□□□□□ -1.44
PTCD3-205ENST00000464541 KRT24Q2M2I5 525 aa6.03□□□□□ -1.44
PTCD3-205ENST00000464541 CDC73Q6P1J9 531 aa6.03□□□□□ -1.44
PTCD3-205ENST00000464541 LCTLQ6UWM7 567 aa6.03□□□□□ -1.44
PTCD3-205ENST00000464541 MTSS1LQ765P7 747 aa6.03□□□□□ -1.44
PTCD3-205ENST00000464541 TDRPQ86YL5 185 aa6.03□□□□□ -1.44
PTCD3-205ENST00000464541 SLC35F3Q8IY50 421 aa6.03□□□□□ -1.44
PTCD3-205ENST00000464541 HUS1BQ8NHY5 278 aa6.03□□□□□ -1.44
PTCD3-205ENST00000464541 ADAMTS15Q8TE58 950 aa6.03□□□□□ -1.44
PTCD3-205ENST00000464541 C7orf26Q96N11 449 aa6.03□□□□□ -1.44
PTCD3-205ENST00000464541 SH3GL2Q99962 352 aa6.03□□□□□ -1.44
PTCD3-205ENST00000464541 FAM110AQ9BQ89 295 aa6.03□□□□□ -1.44
PTCD3-205ENST00000464541 IL25Q9H293 177 aa6.03□□□□□ -1.44
PTCD3-205ENST00000464541 MKKSQ9NPJ1 570 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-205ENST00000464541 SLCO3A1Q9UIG8 710 aa6.03□□□□□ -1.44
PTCD3-205ENST00000464541 HAO1Q9UJM8 370 aa6.03□□□□□ -1.44
PTCD3-205ENST00000464541 FBXO9Q9UK97 447 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-205ENST00000464541 CDC14AQ9UNH5 594 aa6.03□□□□□ -1.44
PTCD3-205ENST00000464541 AAR2Q9Y312 384 aaKnown RBP6.03□□□□□ -1.44
PTCD3-205ENST00000464541 A0A1W2PRG0 241 aa6.02□□□□□ -1.45
PTCD3-205ENST00000464541 ZIC3O60481 467 aa6.02□□□□□ -1.45
PTCD3-205ENST00000464541 PAPSS2O95340 614 aaPredicted RBP6.02□□□□□ -1.45
PTCD3-205ENST00000464541 ATP1A3P13637 1013 aa6.02□□□□□ -1.45
PTCD3-205ENST00000464541 PSMA4P25789 261 aaKnown RBP6.02□□□□□ -1.45
PTCD3-205ENST00000464541 STX2P32856 288 aa6.02□□□□□ -1.45
PTCD3-205ENST00000464541 CCNG2Q16589 344 aa6.02□□□□□ -1.45
PTCD3-205ENST00000464541 CALCRLQ16602 461 aa6.02□□□□□ -1.45
PTCD3-205ENST00000464541 USP41Q3LFD5 358 aa6.02□□□□□ -1.45
PTCD3-205ENST00000464541 AMZ1Q400G9 498 aa6.02□□□□□ -1.45
PTCD3-205ENST00000464541 XKR9Q5GH70 373 aa6.02□□□□□ -1.45
PTCD3-205ENST00000464541 C6orf141Q5SZD1 244 aa6.02□□□□□ -1.45
PTCD3-205ENST00000464541 CAPRIN2Q6IMN6 1127 aaKnown RBP6.02□□□□□ -1.45
PTCD3-205ENST00000464541 METTL2BQ6P1Q9 378 aaKnown RBP6.02□□□□□ -1.45
PTCD3-205ENST00000464541 FAM122CQ6P4D5 195 aa6.02□□□□□ -1.45
PTCD3-205ENST00000464541 ATF7IPQ6VMQ6 1270 aa6.02□□□□□ -1.45
PTCD3-205ENST00000464541 GSTA5Q7RTV2 222 aa6.02□□□□□ -1.45
PTCD3-205ENST00000464541 ZBTB2Q8N680 514 aa6.02□□□□□ -1.45
PTCD3-205ENST00000464541 PAF1Q8N7H5 531 aa6.02□□□□□ -1.45
PTCD3-205ENST00000464541 METTL6Q8TCB7 284 aa6.02□□□□□ -1.45
PTCD3-205ENST00000464541 MAGEC3Q8TD91 643 aa6.02□□□□□ -1.45
PTCD3-205ENST00000464541 WASF1Q92558 559 aa6.02□□□□□ -1.45
PTCD3-205ENST00000464541 MTBPQ96DY7 904 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms