RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 PLEKHA5Q9HAU0 1116 aa2.62□□□□□ -1.99
SYPL1-203ENST00000460770 NOX4Q9NPH5 578 aa2.62□□□□□ -1.99
SYPL1-203ENST00000460770 SMYD2Q9NRG4 433 aa2.62□□□□□ -1.99
SYPL1-203ENST00000460770 DDX43Q9NXZ2 648 aaKnown RBP2.62□□□□□ -1.99
SYPL1-203ENST00000460770 AMDHD2Q9Y303 409 aa2.62□□□□□ -1.99
SYPL1-203ENST00000460770 ZNF711Q9Y462 761 aa2.62□□□□□ -1.99
SYPL1-203ENST00000460770 ZNF587BE7ETH6 402 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 PLRG1O43660 514 aaKnown RBP2.61□□□□□ -1.99
SYPL1-203ENST00000460770 PCDH7O60245 1069 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 NDUFS7O75251 213 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 CAVIN2O95810 425 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 CSTBP04080 98 aaKnown RBP2.61□□□□□ -1.99
SYPL1-203ENST00000460770 WEE2P0C1S8 567 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 SRD5A1P18405 259 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 PIGAP37287 484 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 CLCNKAP51800 687 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 NR0B1P51843 470 aaKnown RBP2.61□□□□□ -1.99
SYPL1-203ENST00000460770 GALNT1Q10472 559 aaPredicted RBP2.61□□□□□ -1.99
SYPL1-203ENST00000460770 GRIK2Q13002 908 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 KRT24Q2M2I5 525 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 C14orf177Q52M58 125 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 ESCO2Q56NI9 601 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 KCNT1Q5JUK3 1230 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 SH2D4BQ5SQS7 431 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 WDR73Q6P4I2 378 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 KMT5CQ86Y97 462 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.61□□□□□ -1.99
SYPL1-203ENST00000460770 LYG1Q8N1E2 194 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 CPXM2Q8N436 756 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 TMEM57Q8N5G2 664 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 PARP16Q8N5Y8 322 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 AGBL3Q8NEM8 1001 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 GJC3Q8NFK1 279 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 TAS1R2Q8TE23 839 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 THAP4Q8WY91 577 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 CNOT9Q92600 299 aaKnown RBP2.61□□□□□ -1.99
SYPL1-203ENST00000460770 RNFT2Q96EX2 444 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 CD180Q99467 661 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 KLHL1Q9NR64 748 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 HDAC6Q9UBN7 1215 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 DERAQ9Y315 318 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 SMAD5-AS1Q9Y6J3 95 aa2.61□□□□□ -1.99
SYPL1-203ENST00000460770 C17orf113A0A1B0GUU1 675 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 SOCS6O14544 535 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 TUBBP07437 444 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 INHBAP08476 426 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 CDH1P12830 882 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 SLC2A4P14672 509 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 DDX5P17844 614 aaKnown RBP2.6□□□□□ -1.99
SYPL1-203ENST00000460770 RYKP34925 604 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 NOVP48745 357 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 TUBB4BP68371 445 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 RELQ04864 619 aaPredicted RBP2.6□□□□□ -1.99
SYPL1-203ENST00000460770 TBL3Q12788 808 aaKnown RBP2.6□□□□□ -1.99
SYPL1-203ENST00000460770 FOXD4Q12950 439 aaPredicted RBP2.6□□□□□ -1.99
SYPL1-203ENST00000460770 SOWAHAQ2M3V2 549 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 ZNF876PQ49A33 203 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 SLC35E4Q6ICL7 350 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 XRRA1Q6P2D8 792 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 ARHGAP11AQ6P4F7 1023 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 DSG4Q86SJ6 1040 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 RNF113BQ8IZP6 322 aaKnown RBP2.6□□□□□ -1.99
SYPL1-203ENST00000460770 LINS1Q8NG48 757 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 ERGIC1Q969X5 290 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 ZNF501Q96CX3 271 aaPredicted RBP2.6□□□□□ -1.99
SYPL1-203ENST00000460770 ZNF583Q96ND8 569 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 ZNF570Q96NI8 536 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 PAGR1Q9BTK6 254 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 HERC2P3Q9BVR0 1158 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 CHMP4AQ9BY43 222 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 CHODLQ9H9P2 273 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 CISD1Q9NZ45 108 aaKnown RBP2.6□□□□□ -1.99
SYPL1-203ENST00000460770 KCNS2Q9ULS6 477 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 CARD8Q9Y2G2 431 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 GDAQ9Y2T3 454 aa2.6□□□□□ -1.99
SYPL1-203ENST00000460770 A0A0U1RQF3 1178 aa2.59□□□□□ -1.99
SYPL1-203ENST00000460770 A0A1B0GVY2 172 aa2.59□□□□□ -1.99
SYPL1-203ENST00000460770 PMS2P5A8MQ11 134 aa2.59□□□□□ -1.99
SYPL1-203ENST00000460770 KLRF2D3W0D1 207 aa2.59□□□□□ -1.99
SYPL1-203ENST00000460770 CEP104O60308 925 aa2.59□□□□□ -1.99
SYPL1-203ENST00000460770 ALDH4A1P30038 563 aa2.59□□□□□ -1.99
SYPL1-203ENST00000460770 DRG2P55039 364 aaKnown RBP2.59□□□□□ -1.99
SYPL1-203ENST00000460770 ACTR2P61160 394 aa2.59□□□□□ -1.99
SYPL1-203ENST00000460770 GAGE5Q13069 117 aa2.59□□□□□ -1.99
SYPL1-203ENST00000460770 GAGE6Q13070 117 aa2.59□□□□□ -1.99
SYPL1-203ENST00000460770 EFNB3Q15768 340 aa2.59□□□□□ -1.99
SYPL1-203ENST00000460770 CCDC38Q502W7 563 aa2.59□□□□□ -1.99
SYPL1-203ENST00000460770 CEACAM20Q6UY09 585 aa2.59□□□□□ -1.99
SYPL1-203ENST00000460770 STXBP4Q6ZWJ1 553 aa2.59□□□□□ -1.99
SYPL1-203ENST00000460770 SATL1Q86VE3 508 aa2.59□□□□□ -1.99
SYPL1-203ENST00000460770 ADAD2Q8NCV1 583 aaKnown RBP2.59□□□□□ -1.99
SYPL1-203ENST00000460770 OR10V1Q8NGI7 309 aa2.59□□□□□ -1.99
SYPL1-203ENST00000460770 HCAR2Q8TDS4 363 aa2.59□□□□□ -1.99
SYPL1-203ENST00000460770 RAB40AQ8WXH6 277 aa2.59□□□□□ -1.99
SYPL1-203ENST00000460770 SNAPC3Q92966 411 aa2.59□□□□□ -1.99
SYPL1-203ENST00000460770 ANKRD9Q96BM1 317 aaPredicted RBP2.59□□□□□ -1.99
SYPL1-203ENST00000460770 LGALS12Q96DT0 336 aa2.59□□□□□ -1.99
SYPL1-203ENST00000460770 POLR3GLQ9BT43 218 aa2.59□□□□□ -1.99
SYPL1-203ENST00000460770 TWSG1Q9GZX9 223 aa2.59□□□□□ -1.99
SYPL1-203ENST00000460770 LRRC4Q9HBW1 653 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms