RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 TLK1Q9UKI8 766 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 TDRKHQ9Y2W6 561 aaKnown RBP12.5□□□□□ -0.41
LINC00959-201ENST00000456581 SQORQ9Y6N5 450 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 CHD7Q9P2D1 2997 aa12.5□□□□□ -0.41
LINC00959-201ENST00000456581 C5orf42Q9H799 3197 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 NYNRINQ9P2P1 1898 aaKnown RBP12.49□□□□□ -0.41
LINC00959-201ENST00000456581 TCAF2A6NFQ2 919 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 ADAM12O43184 909 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 CNTN5O94779 1100 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 MYL4P12829 197 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 CPB1P15086 417 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 PSMD5Q16401 504 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 LIPMQ5VYY2 423 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 KCTD11Q693B1 232 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 ESRP1Q6NXG1 681 aaKnown RBP12.49□□□□□ -0.41
LINC00959-201ENST00000456581 RNF19BQ6ZMZ0 732 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 FAM126BQ8IXS8 530 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 NUP93Q8N1F7 819 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 MYO1HQ8N1T3 1032 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 ARHGAP18Q8N392 663 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 CEP70Q8NHQ1 597 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 GIPC2Q8TF65 315 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 LRTOMTQ8WZ04 291 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 MYEOVQ96EZ4 313 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 TEKT5Q96M29 485 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 MRPL1Q9BYD6 325 aaKnown RBP12.49□□□□□ -0.41
LINC00959-201ENST00000456581 DRC3Q9H069 523 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 GBA3Q9H227 469 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 VCX3AQ9NNX9 186 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 CASS4Q9NQ75 786 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 TMEM161AQ9NX61 479 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 GIMAP2Q9UG22 337 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 PHF24Q9UPV7 400 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 CDYLQ9Y232 598 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 RAP2CQ9Y3L5 183 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 TRIM17Q9Y577 477 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 PCDHB7Q9Y5E2 793 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 MYLKQ15746 1914 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 E7ENX8 843 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 E9PAM4 449 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 CAPN15O75808 1086 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 STT3AP46977 705 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 DUSP4Q13115 394 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 MGAT5BQ3V5L5 792 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 RARS2Q5T160 578 aaKnown RBP12.49□□□□□ -0.41
LINC00959-201ENST00000456581 MARVELD2Q8N4S9 558 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 TXNDC5Q8NBS9 432 aaKnown RBP12.49□□□□□ -0.41
LINC00959-201ENST00000456581 IPMKQ8NFU5 416 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 ABTB1Q969K4 478 aaPredicted RBP12.49□□□□□ -0.41
LINC00959-201ENST00000456581 HSPBAP1Q96EW2 488 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 DEFB118Q96PH6 123 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 CCDC167Q9P0B6 97 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 PATJQ8NI35 1801 aa12.49□□□□□ -0.41
LINC00959-201ENST00000456581 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.48□□□□□ -0.41
LINC00959-201ENST00000456581 CKMT2P17540 419 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 TAF10Q12962 218 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 DYNC1I2Q13409 638 aaKnown RBP12.48□□□□□ -0.41
LINC00959-201ENST00000456581 DBN1Q16643 649 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 ALFQ53S48 1182 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 ZYG11AQ6WRX3 759 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 LDB1Q86U70 411 aaPredicted RBP12.48□□□□□ -0.41
LINC00959-201ENST00000456581 ATPAF2Q8N5M1 289 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 ISL2Q96A47 359 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 DGCR14Q96DF8 476 aaKnown RBP12.48□□□□□ -0.41
LINC00959-201ENST00000456581 ATXN10Q9UBB4 475 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 TBKBP1A7MCY6 615 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 ACOT8O14734 319 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 NCAM2O15394 837 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 MAFKO60675 156 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 CTBSQ01459 385 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 RBM20Q5T481 1227 aaKnown RBP12.48□□□□□ -0.41
LINC00959-201ENST00000456581 MANEALQ5VSG8 457 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 LRRC8EQ6NSJ5 796 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 C16orf89Q6UX73 402 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 TICAM1Q8IUC6 712 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 DCP1BQ8IZD4 617 aaKnown RBP12.48□□□□□ -0.41
LINC00959-201ENST00000456581 PDCD6IPQ8WUM4 868 aaKnown RBP12.48□□□□□ -0.41
LINC00959-201ENST00000456581 PHF21BQ96EK2 531 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 LRCH3Q96II8 777 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 TSEN34Q9BSV6 310 aaKnown RBP12.48□□□□□ -0.41
LINC00959-201ENST00000456581 NAT9Q9BTE0 207 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 MCMBPQ9BTE3 642 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.48□□□□□ -0.419e-6■■■■■ 32.4
LINC00959-201ENST00000456581 BRD8Q9H0E9 1235 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 ZNF385DQ9H6B1 395 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 NOL6Q9H6R4 1146 aaKnown RBP12.48□□□□□ -0.41
LINC00959-201ENST00000456581 COQ10BQ9H8M1 238 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 IL1RL2Q9HB29 575 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 ZBTB26Q9HCK0 441 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 FBRSL1Q9HCM7 1045 aaKnown RBP12.48□□□□□ -0.41
LINC00959-201ENST00000456581 TRPC7Q9HCX4 862 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 C6orf203Q9P0P8 240 aaPredicted RBP12.48□□□□□ -0.41
LINC00959-201ENST00000456581 PCDHB5Q9Y5E4 795 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 PTGDR2Q9Y5Y4 395 aa12.48□□□□□ -0.41
LINC00959-201ENST00000456581 TMEM114B3SHH9 223 aa12.47□□□□□ -0.41
LINC00959-201ENST00000456581 PMPCBO75439 489 aa12.47□□□□□ -0.41
LINC00959-201ENST00000456581 CLIC3O95833 236 aa12.47□□□□□ -0.41
LINC00959-201ENST00000456581 MPOP05164 745 aa12.47□□□□□ -0.41
LINC00959-201ENST00000456581 TFPTP0C1Z6 253 aa12.47□□□□□ -0.41
LINC00959-201ENST00000456581 PIM1P11309 404 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms